TY - JOUR
T1 - Resolving bundle-specific intra-axonal T2 values within a voxel using diffusion-relaxation tract-based estimation
AU - Barakovic, Muhamed
AU - Tax, Chantal M W
AU - Rudrapatna, Umesh
AU - Chamberland, Maxime
AU - Rafael-Patino, Jonathan
AU - Granziera, Cristina
AU - Thiran, Jean-Philippe
AU - Daducci, Alessandro
AU - Canales-Rodríguez, Erick J
AU - Jones, Derek K
N1 - Funding Information:
The work was supported by the Swiss National Science Foundation (SNSF, grants 31003A_157063 , 205320_175974 , and Ambizione grant PZ00P2_185814 to EJC-R). This work was also made possible thanks to the resources and expertise of the CIBM Center for Biomedical Imaging, a Swiss research center of excellence founded and supported by Lausanne University Hospital (CHUV), University of Lausanne (UNIL), Ecole Polytechnique Federale de Lausanne (EPFL), University of Geneva (UNIGE) and Geneva University Hospitals (HUG). DKJ, CMWT, and MC were all supported by a Wellcome Trust Investigator Award ( 096646/Z/11/Z ), CMWT by a Sir Henry Wellcome Fellowship (215944/Z/19/Z) and a Veni grant (17331) from the Dutch Research Council (NWO), and DKJ by a Wellcome Trust Strategic Award ( 104943/Z/14/Z ). The data were acquired at the UK National Facility for In Vivo MR Imaging of Human Tissue Microstructure funded by the EPSRC (grant EP/M029778/1 ), and The Wolfson Foundation.
Publisher Copyright:
© 2020 The Authors
Copyright:
Copyright 2020 Elsevier B.V., All rights reserved.
PY - 2021/2/15
Y1 - 2021/2/15
N2 - At the typical spatial resolution of MRI in the human brain, approximately 60-90% of voxels contain multiple fiber populations. Quantifying microstructural properties of distinct fiber populations within a voxel is therefore challenging but necessary. While progress has been made for diffusion and T1-relaxation properties, how to resolve intra-voxel T2 heterogeneity remains an open question. Here a novel framework, named COMMIT-T2, is proposed that uses tractography-based spatial regularization with diffusion-relaxometry data to estimate multiple intra-axonal T2 values within a voxel. Unlike previously-proposed voxel-based T2 estimation methods, which (when applied in white matter) implicitly assume just one fiber bundle in the voxel or the same T2 for all bundles in the voxel, COMMIT-T2 can recover specific T2 values for each unique fiber population passing through the voxel. In this approach, the number of recovered unique T2 values is not determined by a number of model parameters set a priori, but rather by the number of tractography-reconstructed streamlines passing through the voxel. Proof-of-concept is provided in silico and in vivo, including a demonstration that distinct tract-specific T2 profiles can be recovered even in the three-way crossing of the corpus callosum, arcuate fasciculus, and corticospinal tract. We demonstrate the favourable performance of COMMIT-T2 compared to that of voxelwise approaches for mapping intra-axonal T2 exploiting diffusion, including a direction-averaged method and AMICO-T2, a new extension to the previously-proposed Accelerated Microstructure Imaging via Convex Optimization (AMICO) framework.
AB - At the typical spatial resolution of MRI in the human brain, approximately 60-90% of voxels contain multiple fiber populations. Quantifying microstructural properties of distinct fiber populations within a voxel is therefore challenging but necessary. While progress has been made for diffusion and T1-relaxation properties, how to resolve intra-voxel T2 heterogeneity remains an open question. Here a novel framework, named COMMIT-T2, is proposed that uses tractography-based spatial regularization with diffusion-relaxometry data to estimate multiple intra-axonal T2 values within a voxel. Unlike previously-proposed voxel-based T2 estimation methods, which (when applied in white matter) implicitly assume just one fiber bundle in the voxel or the same T2 for all bundles in the voxel, COMMIT-T2 can recover specific T2 values for each unique fiber population passing through the voxel. In this approach, the number of recovered unique T2 values is not determined by a number of model parameters set a priori, but rather by the number of tractography-reconstructed streamlines passing through the voxel. Proof-of-concept is provided in silico and in vivo, including a demonstration that distinct tract-specific T2 profiles can be recovered even in the three-way crossing of the corpus callosum, arcuate fasciculus, and corticospinal tract. We demonstrate the favourable performance of COMMIT-T2 compared to that of voxelwise approaches for mapping intra-axonal T2 exploiting diffusion, including a direction-averaged method and AMICO-T2, a new extension to the previously-proposed Accelerated Microstructure Imaging via Convex Optimization (AMICO) framework.
KW - COMMIT
KW - Diffusion MRI
KW - Human brain
KW - T relaxometry
KW - Tractography
KW - White matter
UR - http://www.scopus.com/inward/record.url?scp=85098461672&partnerID=8YFLogxK
U2 - 10.1016/j.neuroimage.2020.117617
DO - 10.1016/j.neuroimage.2020.117617
M3 - Article
C2 - 33301934
SN - 1053-8119
VL - 227
SP - 117617
JO - NeuroImage
JF - NeuroImage
M1 - 117617
ER -