TY - JOUR
T1 - Reporting guidelines for human microbiome research
T2 - the STORMS checklist
AU - Mirzayi, Chloe
AU - Renson, Audrey
AU - Zohra, Fatima
AU - Elsafoury, Shaimaa
AU - Geistlinger, Ludwig
AU - Kasselman, Lora J
AU - Eckenrode, Kelly
AU - van de Wijgert, Janneke
AU - Loughman, Amy
AU - Marques, Francine Z
AU - MacIntyre, David A
AU - Arumugam, Manimozhiyan
AU - Azhar, Rimsha
AU - Beghini, Francesco
AU - Bergstrom, Kirk
AU - Bhatt, Ami
AU - Bisanz, Jordan E
AU - Braun, Jonathan
AU - Bravo, Hector Corrada
AU - Buck, Gregory A
AU - Bushman, Frederic
AU - Casero, David
AU - Clarke, Gerard
AU - Collado, Maria Carmen
AU - Cotter, Paul D
AU - Cryan, John F
AU - Demmer, Ryan T
AU - Devkota, Suzanne
AU - Elinav, Eran
AU - Escobar, Juan S
AU - Fettweis, Jennifer
AU - Finn, Robert D
AU - Fodor, Anthony A
AU - Forslund, Sofia
AU - Franke, Andre
AU - Furlanello, Cesare
AU - Gilbert, Jack
AU - Grice, Elizabeth
AU - Haibe-Kains, Benjamin
AU - Handley, Scott
AU - Herd, Pamela
AU - Holmes, Susan
AU - Jacobs, Jonathan P
AU - Karstens, Lisa
AU - Knight, Rob
AU - Knights, Dan
AU - Koren, Omry
AU - Kwon, Douglas S
AU - Langille, Morgan
AU - Lindsay, Brianna
N1 - Funding Information:
Research reported in this publication was supported by the National Cancer Institute of the National Institutes of Health under award number 5R01CA230551. The content is solely the responsibility of the authors and does not necessarily represent the official views of the National Institutes of Health. Additionally, J.B.D. was supported by the Leverhulme Trust.
Publisher Copyright:
© 2021, The Author(s), under exclusive licence to Springer Nature America, Inc.
PY - 2021/11/18
Y1 - 2021/11/18
N2 - The particularly interdisciplinary nature of human microbiome research makes the organization and reporting of results spanning epidemiology, biology, bioinformatics, translational medicine and statistics a challenge. Commonly used reporting guidelines for observational or genetic epidemiology studies lack key features specific to microbiome studies. Therefore, a multidisciplinary group of microbiome epidemiology researchers adapted guidelines for observational and genetic studies to culture-independent human microbiome studies, and also developed new reporting elements for laboratory, bioinformatics and statistical analyses tailored to microbiome studies. The resulting tool, called 'Strengthening The Organization and Reporting of Microbiome Studies' (STORMS), is composed of a 17-item checklist organized into six sections that correspond to the typical sections of a scientific publication, presented as an editable table for inclusion in supplementary materials. The STORMS checklist provides guidance for concise and complete reporting of microbiome studies that will facilitate manuscript preparation, peer review, and reader comprehension of publications and comparative analysis of published results.
AB - The particularly interdisciplinary nature of human microbiome research makes the organization and reporting of results spanning epidemiology, biology, bioinformatics, translational medicine and statistics a challenge. Commonly used reporting guidelines for observational or genetic epidemiology studies lack key features specific to microbiome studies. Therefore, a multidisciplinary group of microbiome epidemiology researchers adapted guidelines for observational and genetic studies to culture-independent human microbiome studies, and also developed new reporting elements for laboratory, bioinformatics and statistical analyses tailored to microbiome studies. The resulting tool, called 'Strengthening The Organization and Reporting of Microbiome Studies' (STORMS), is composed of a 17-item checklist organized into six sections that correspond to the typical sections of a scientific publication, presented as an editable table for inclusion in supplementary materials. The STORMS checklist provides guidance for concise and complete reporting of microbiome studies that will facilitate manuscript preparation, peer review, and reader comprehension of publications and comparative analysis of published results.
UR - http://www.scopus.com/inward/record.url?scp=85119621141&partnerID=8YFLogxK
U2 - 10.1038/s41591-021-01552-x
DO - 10.1038/s41591-021-01552-x
M3 - Article
C2 - 34789871
SN - 1078-8956
VL - 27
SP - 1885
EP - 1892
JO - Nature Medicine
JF - Nature Medicine
IS - 11
ER -