Problems in detecting misfit of latent class models in diagnostic research without a gold standard were shown

Maarten van Smeden, Daniel L Oberski, Johannes B Reitsma, Jeroen K Vermunt, Karel G M Moons, JAH de Groot

Research output: Contribution to journalArticleAcademicpeer-review

Abstract

OBJECTIVES: The objective of this study was to evaluate the performance of goodness-of-fit testing to detect relevant violations of the assumptions underlying the criticized 'standard' 2-class latent class model. Often used to obtain sensitivity and specificity estimates for diagnostic tests in the absence of a gold reference standard, this model relies on assuming that diagnostic test errors are independent. When this assumption is violated, accuracy estimates may be biased: goodness-of-fit testing is often used to evaluate the assumption and prevent bias.

STUDY DESIGN AND SETTING: We investigate the performance of goodness-of-fit testing by Monte Carlo simulation. The simulation scenarios are based on three empirical examples.

RESULTS: Goodness-of-fit tests lack power to detect relevant misfit of the standard 2-class latent class model at sample sizes that are typically found in empirical diagnostic studies. The goodness-of-fit tests that are based on asymptotic theory are not robust to the sparseness of data. A parametric bootstrap procedure improves the evaluation of goodness-of-fit in the case of sparse data.

CONCLUSION: Our simulation study suggests that relevant violation of the local independence assumption underlying the standard 2-class latent class model may remain undetected in empirical diagnostic studies, potentially leading to biased estimates of sensitivity and specificity.

Original languageEnglish
Pages (from-to)158-166
JournalJournal of Clinical Epidemiology
Volume74
DOIs
Publication statusPublished - Jun 2016

Keywords

  • Latent class analysis
  • Local independence assumption
  • Goodness of fit
  • Simulation
  • No gold standard
  • Sensitivity and specificity

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