Evaluation of multiparametric MRI for deep learning-based segmentation of Wilms tumor

Myrthe A.D. Buser*, Marc H.W.A. Wijnen, Alida F.W. Van Der Steeg, Bas H.M. Van Der Velden

*Corresponding author for this work

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Abstract

Deep learning techniques to segment Wilms tumor typically use a single MRI sequence as input. The aim of this study was to assess whether multiparametric MRI input improves Wilms tumor segmentation. 45 patients were consecutively included, of which 36 were used for training and nine for testing. All seven input combinations of postcontrast T1-weighted imaging, T2-weighted imaging, and diffusion weighted imaging (DWI) were used for nnU-Net training. Dice scores and the 95th percentile of the Haussdorf distance (HD95) were used to evaluate the input combinations. The median Dice score was highest when combining all MRI sequences (Dice = 0.93), the median HD95 was lowest when combining postcontrast T1-weighted imaging and DWI (HD95 = 5.4 mm). Single-parametric DWI input performed significantly worse than other input combinations (median Dice = 0.64, median HD95 = 29.5 mm, p = 0.004). All other combinations, including standalone sequences, showed similar performance to each other. Our results suggest that adding sequences to standalone T1-weighted or T2-weighted imaging does not significantly improve segmentation results.

Original languageEnglish
Title of host publicationMedical Imaging 2023
Subtitle of host publicationImage Perception, Observer Performance, and Technology Assessment
EditorsClaudia R. Mello-Thoms, Yan Chen
PublisherSPIE
ISBN (Electronic)9781510660397
DOIs
Publication statusPublished - 2023
EventMedical Imaging 2023: Image Perception, Observer Performance, and Technology Assessment - San Diego, United States
Duration: 21 Feb 202323 Feb 2023

Publication series

NameProgress in Biomedical Optics and Imaging - Proceedings of SPIE
Volume12467
ISSN (Print)1605-7422

Conference

ConferenceMedical Imaging 2023: Image Perception, Observer Performance, and Technology Assessment
Country/TerritoryUnited States
CitySan Diego
Period21/02/2323/02/23

Keywords

  • deep learning
  • input assessment
  • multiparametric MRI
  • pediatric oncology
  • segmentation
  • Wilms tumor

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