Draft genome sequences of Mycobacterium setense type strain DSM-45070 and the nonpathogenic strain Manresensis isolated from the bank of the Cardener River in Manresa, Catalonia, Spain

Gabriel Rech; Cristina Vilaplana; Juan Velasco; Raquel Pluvinet; Sheila Santín; Cristina Prat; Esther Julián; Fernando Alcaide; Iñaki Comas; Lauro Sumoy; Pere Joan Cardona

doi:10.1128/genomeA.01485-14

Draft genome sequences of Mycobacterium setense type strain DSM-45070 and the nonpathogenic strain Manresensis isolated from the bank of the Cardener River in Manresa, Catalonia, Spain

Gabriel Rech^*
, Cristina Vilaplana
, Juan Velasco
, Raquel Pluvinet
, Sheila Santín
, Cristina Prat
, Esther Julián
, Fernando Alcaide
, Iñaki Comas
, Lauro Sumoy
, Pere Joan Cardona

^*Corresponding author for this work

Research output: Contribution to journal › Article › Academic › peer-review

9 Citations (Scopus)

Abstract

We present here the draft genome sequences of two Mycobacterium setense strains. One of them corresponds to the M. setense type strain DSM-45070, originally isolated from a patient with a posttraumatic chronic skin abscess. The other one corresponds to the nonpathogenic M. setense strain Manresensis, isolated from the Cardener River crossing Manresa, Catalonia, Spain. A comparative genomic analysis shows a smaller genome size and fewer genes in M. setense strain Manresensis relative to those of the type strain, and it shows the genome segments unique to each strain.

Original language	English
Article number	e01485-14
Journal	Genome Announcements
Volume	3
Issue number	1
DOIs	https://doi.org/10.1128/genomeA.01485-14
Publication status	Published - 2015
Externally published	Yes

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Rech, G., Vilaplana, C., Velasco, J., Pluvinet, R., Santín, S., Prat, C., Julián, E., Alcaide, F., Comas, I., Sumoy, L., & Cardona, P. J. (2015). Draft genome sequences of Mycobacterium setense type strain DSM-45070 and the nonpathogenic strain Manresensis isolated from the bank of the Cardener River in Manresa, Catalonia, Spain. Genome Announcements, 3(1), Article e01485-14. https://doi.org/10.1128/genomeA.01485-14

@article{91589a9cb2064b3c897d5da6fd2c93bf,

title = "Draft genome sequences of Mycobacterium setense type strain DSM-45070 and the nonpathogenic strain Manresensis isolated from the bank of the Cardener River in Manresa, Catalonia, Spain",

abstract = "We present here the draft genome sequences of two Mycobacterium setense strains. One of them corresponds to the M. setense type strain DSM-45070, originally isolated from a patient with a posttraumatic chronic skin abscess. The other one corresponds to the nonpathogenic M. setense strain Manresensis, isolated from the Cardener River crossing Manresa, Catalonia, Spain. A comparative genomic analysis shows a smaller genome size and fewer genes in M. setense strain Manresensis relative to those of the type strain, and it shows the genome segments unique to each strain.",

author = "Gabriel Rech and Cristina Vilaplana and Juan Velasco and Raquel Pluvinet and Sheila Sant{\'i}n and Cristina Prat and Esther Juli{\'a}n and Fernando Alcaide and I{\~n}aki Comas and Lauro Sumoy and Cardona, \{Pere Joan\}",

note = "Funding Information: This study was funded by the Spanish Government, Instituto de Salud Carlos III (ISCIII), through the CIBER CRP-TB and the FIS 011/01702 grants to P.-J.C., and by Manresana de Micobacteriologia, s.l. Additional support came from IMPPC core funding from the Generalitat de Catalunya to L.S. J.V., G.R., and S.S. were funded by grant ADE10/00026 from ISCIII. J.V. was also cofunded by ISIS contract II11/00014 from ISCIII. I.C. is supported by the Spanish Ministerio de Economia y Competitividad (MINECO) through a Ram{\'o}n y Cajal contract RYC-2012-10627 and grant SAF2013-43521-R. E.J. was funded by PI1001438 and C.V. by Miguel Servet contract CP13/00174. Wethank Pilar Armengol and Anna Oliveira from the IGTP Genomics Unit for assistance with MiSeq sequencing and Luc{\'i}a Haba for technical assistance. Publisher Copyright: {\textcopyright} 2015 Rech et al.",

year = "2015",

doi = "10.1128/genomeA.01485-14",

language = "English",

volume = "3",

journal = "Genome Announcements",

issn = "2169-8287",

publisher = "American Society for Microbiology",

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Rech, G, Vilaplana, C, Velasco, J, Pluvinet, R, Santín, S, Prat, C, Julián, E, Alcaide, F, Comas, I, Sumoy, L & Cardona, PJ 2015, 'Draft genome sequences of Mycobacterium setense type strain DSM-45070 and the nonpathogenic strain Manresensis isolated from the bank of the Cardener River in Manresa, Catalonia, Spain', Genome Announcements, vol. 3, no. 1, e01485-14. https://doi.org/10.1128/genomeA.01485-14

Draft genome sequences of Mycobacterium setense type strain DSM-45070 and the nonpathogenic strain Manresensis isolated from the bank of the Cardener River in Manresa, Catalonia, Spain. / Rech, Gabriel; Vilaplana, Cristina; Velasco, Juan et al.
In: Genome Announcements, Vol. 3, No. 1, e01485-14, 2015.

Research output: Contribution to journal › Article › Academic › peer-review

TY - JOUR

T1 - Draft genome sequences of Mycobacterium setense type strain DSM-45070 and the nonpathogenic strain Manresensis isolated from the bank of the Cardener River in Manresa, Catalonia, Spain

AU - Rech, Gabriel

AU - Vilaplana, Cristina

AU - Velasco, Juan

AU - Pluvinet, Raquel

AU - Santín, Sheila

AU - Prat, Cristina

AU - Julián, Esther

AU - Alcaide, Fernando

AU - Comas, Iñaki

AU - Sumoy, Lauro

AU - Cardona, Pere Joan

N1 - Funding Information: This study was funded by the Spanish Government, Instituto de Salud Carlos III (ISCIII), through the CIBER CRP-TB and the FIS 011/01702 grants to P.-J.C., and by Manresana de Micobacteriologia, s.l. Additional support came from IMPPC core funding from the Generalitat de Catalunya to L.S. J.V., G.R., and S.S. were funded by grant ADE10/00026 from ISCIII. J.V. was also cofunded by ISIS contract II11/00014 from ISCIII. I.C. is supported by the Spanish Ministerio de Economia y Competitividad (MINECO) through a Ramón y Cajal contract RYC-2012-10627 and grant SAF2013-43521-R. E.J. was funded by PI1001438 and C.V. by Miguel Servet contract CP13/00174. Wethank Pilar Armengol and Anna Oliveira from the IGTP Genomics Unit for assistance with MiSeq sequencing and Lucía Haba for technical assistance. Publisher Copyright: © 2015 Rech et al.

PY - 2015

Y1 - 2015

N2 - We present here the draft genome sequences of two Mycobacterium setense strains. One of them corresponds to the M. setense type strain DSM-45070, originally isolated from a patient with a posttraumatic chronic skin abscess. The other one corresponds to the nonpathogenic M. setense strain Manresensis, isolated from the Cardener River crossing Manresa, Catalonia, Spain. A comparative genomic analysis shows a smaller genome size and fewer genes in M. setense strain Manresensis relative to those of the type strain, and it shows the genome segments unique to each strain.

AB - We present here the draft genome sequences of two Mycobacterium setense strains. One of them corresponds to the M. setense type strain DSM-45070, originally isolated from a patient with a posttraumatic chronic skin abscess. The other one corresponds to the nonpathogenic M. setense strain Manresensis, isolated from the Cardener River crossing Manresa, Catalonia, Spain. A comparative genomic analysis shows a smaller genome size and fewer genes in M. setense strain Manresensis relative to those of the type strain, and it shows the genome segments unique to each strain.

UR - https://www.scopus.com/pages/publications/85007148166

U2 - 10.1128/genomeA.01485-14

DO - 10.1128/genomeA.01485-14

M3 - Article

AN - SCOPUS:85007148166

SN - 2169-8287

VL - 3

JO - Genome Announcements

JF - Genome Announcements

IS - 1

M1 - e01485-14

ER -

Draft genome sequences of Mycobacterium setense type strain DSM-45070 and the nonpathogenic strain Manresensis isolated from the bank of the Cardener River in Manresa, Catalonia, Spain

Abstract

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