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Direct detection of Trichosporon asahii in blood using a quantitative polymerase chain reaction assay: development and validation in spiked samples

  • Matheus Naves de Almeida
  • , Ferry Hagen
  • , Arnaldo L. Colombo
  • , Elaine Cristina Francisco*
  • *Corresponding author for this work

Research output: Contribution to journalArticleAcademicpeer-review

Abstract

Objectives Trichosporon asahii is an emerging opportunistic yeast and the leading cause of invasive trichosporonosis, a life-threatening infection in patients who are immunocompromised and critically ill. Clinical management is complicated by the severity of underlying conditions and intrinsic resistance to echinocandins, underscoring the urgent need for rapid and accurate species-level diagnosis. Here, we developed and validated the first probe-based quantitative PCR (qPCR) assay targeting the intergenic spacer 1 region of T. asahii ribosomal DNA. Methods The assay was evaluated using spiked human blood bottles inoculated with reference and clinical isolates at established concentrations. Results Analytical specificity was assessed against a panel of clinically relevant fungal and bacterial pathogens causing bloodstream infections. The qPCR assay achieved 100% analytical sensitivity and specificity, with no cross-reactivity against nontarget pathogens or human DNA, and generated results within 3 hours of blood culture positivity. Conclusions This novel qPCR assay provided a rapid, sensitive, and specific tool for the detection of T. asahii directly from positive blood cultures. Although validation in clinical samples remains necessary, these findings highlighted its potential to significantly improve early diagnosis and therapeutic decision-making in invasive trichosporonosis.

Original languageEnglish
Article number105209
JournalCMI Communications
Volume3
Issue number3
DOIs
Publication statusPublished - Sept 2026

Keywords

  • Antifungal stewardship
  • Bloodstream infection
  • Invasive fungal infection
  • Invasive trichosporonosis
  • Molecular diagnosis
  • Opportunistic fungal pathogen
  • qPCR
  • Trichosporon asahii

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