TY - JOUR
T1 - Diffusion MRI harmonization enables joint-analysis of multicentre data of patients with cerebral small vessel disease
AU - de Brito Robalo, Bruno M.
AU - Biessels, Geert Jan
AU - Chen, Christopher
AU - Dewenter, Anna
AU - Duering, Marco
AU - Hilal, Saima
AU - Koek, Huiberdina L.
AU - Kopczak, Anna
AU - Yin Ka Lam, Bonnie
AU - Leemans, Alexander
AU - Mok, Vincent
AU - Onkenhout, Laurien P.
AU - van den Brink, Hilde
AU - de Luca, Alberto
N1 - Funding Information:
This work was supported by ZonMw, The Netherlands Organisation for Health Research and Development (VICI grant 91816616 to G.J. Biessels). The research of A. Leemans is supported by VIDI Grant 639.072.411 from the Netherlands Organization for Scientific Research (NWO). Zoom@SVDs is part of the SVDs@target project. SVDs@target has received funding from the European Union’s Horizon2020 research and innovation program under grant agreement No 666881. The CUHK-RI is supported by General Research Fund (grant number GRF CUHK 471911), the Lui CheWoo Institute of Innovative Medicine, and Therese Pei Fong Chow Research Centre for Prevention of Dementia (in memory of Donald H. K. Chow). Funding for the EDIS study was provided by the National Medical Research Council of Singapore.
Funding Information:
This work was supported by ZonMw, The Netherlands Organisation for Health Research and Development (VICI grant 91816616 to G.J. Biessels). The research of A. Leemans is supported by VIDI Grant 639.072.411 from the Netherlands Organization for Scientific Research (NWO). Zoom@SVDs is part of the SVDs@target project. SVDs@target has received funding from the European Union's Horizon2020 research and innovation program under grant agreement No 666881. The CUHK-RI is supported by General Research Fund (grant number GRF CUHK 471911), the Lui CheWoo Institute of Innovative Medicine, and Therese Pei Fong Chow Research Centre for Prevention of Dementia (in memory of Donald H. K. Chow). Funding for the EDIS study was provided by the National Medical Research Council of Singapore. We acknowledge and thank all patients and controls for study participation. We thank members of the Utrecht Vascular Cognitive Impairment (VCI) Study group. We also thank Mathias H?bner for technical assistance and Angelika Doerr as study nurse for her help in the VASCAMY study in Munich.We acknowledge and thank all patients and controls for study participation. We thank members of the Utrecht Vascular Cognitive Impairment (VCI) Study group. We also thank Mathias H?bner for technical assistance and Angelika Doerr as study nurse for her help in the VASCAMY study in Munich.
Publisher Copyright:
© 2021 The Authors
PY - 2021/1
Y1 - 2021/1
N2 - OBJECTIVES: Acquisition-related differences in diffusion magnetic resonance imaging (dMRI) hamper pooling of multicentre data to achieve large sample sizes. A promising solution is to harmonize the raw diffusion signal using rotation invariant spherical harmonic (RISH) features, but this has not been tested in elderly subjects. Here we aimed to establish if RISH harmonization effectively removes acquisition-related differences in multicentre dMRI of elderly subjects with cerebral small vessel disease (SVD), while preserving sensitivity to disease effects.METHODS: Five cohorts of patients with SVD (N = 397) and elderly controls (N = 175) with 3 Tesla MRI on different systems were included. First, to establish effectiveness of harmonization, the RISH method was trained with data of 13 to 15 age and sex-matched controls from each site. Fractional anisotropy (FA) and mean diffusivity (MD) were compared in matched controls between sites using tract-based spatial statistics (TBSS) and voxel-wise analysis, before and after harmonization. Second, to assess sensitivity to disease effects, we examined whether the contrast (effect sizes of FA, MD and peak width of skeletonized MD - PSMD) between patients and controls within each site remained unaffected by harmonization. Finally, we evaluated the association between white matter hyperintensity (WMH) burden, FA, MD and PSMD using linear regression analyses both within individual cohorts as well as with pooled scans from multiple sites, before and after harmonization.RESULTS: Before harmonization, significant differences in FA and MD were observed between matched controls of different sites (p < 0.05). After harmonization these site-differences were removed. Within each site, RISH harmonization did not alter the effect sizes of FA, MD and PSMD between patients and controls (relative change in Cohen's d = 4 %) nor the strength of association with WMH volume (relative change in R
2 = 2.8 %). After harmonization, patient data of all sites could be aggregated in a single analysis to infer the association between WMH volume and FA (R
2 = 0.62), MD (R
2 = 0.64), and PSMD (R
2 = 0.60).
CONCLUSIONS: We showed that RISH harmonization effectively removes acquisition-related differences in dMRI of elderly subjects while preserving sensitivity to SVD-related effects. This study provides proof of concept for future multicentre SVD studies with pooled datasets.
AB - OBJECTIVES: Acquisition-related differences in diffusion magnetic resonance imaging (dMRI) hamper pooling of multicentre data to achieve large sample sizes. A promising solution is to harmonize the raw diffusion signal using rotation invariant spherical harmonic (RISH) features, but this has not been tested in elderly subjects. Here we aimed to establish if RISH harmonization effectively removes acquisition-related differences in multicentre dMRI of elderly subjects with cerebral small vessel disease (SVD), while preserving sensitivity to disease effects.METHODS: Five cohorts of patients with SVD (N = 397) and elderly controls (N = 175) with 3 Tesla MRI on different systems were included. First, to establish effectiveness of harmonization, the RISH method was trained with data of 13 to 15 age and sex-matched controls from each site. Fractional anisotropy (FA) and mean diffusivity (MD) were compared in matched controls between sites using tract-based spatial statistics (TBSS) and voxel-wise analysis, before and after harmonization. Second, to assess sensitivity to disease effects, we examined whether the contrast (effect sizes of FA, MD and peak width of skeletonized MD - PSMD) between patients and controls within each site remained unaffected by harmonization. Finally, we evaluated the association between white matter hyperintensity (WMH) burden, FA, MD and PSMD using linear regression analyses both within individual cohorts as well as with pooled scans from multiple sites, before and after harmonization.RESULTS: Before harmonization, significant differences in FA and MD were observed between matched controls of different sites (p < 0.05). After harmonization these site-differences were removed. Within each site, RISH harmonization did not alter the effect sizes of FA, MD and PSMD between patients and controls (relative change in Cohen's d = 4 %) nor the strength of association with WMH volume (relative change in R
2 = 2.8 %). After harmonization, patient data of all sites could be aggregated in a single analysis to infer the association between WMH volume and FA (R
2 = 0.62), MD (R
2 = 0.64), and PSMD (R
2 = 0.60).
CONCLUSIONS: We showed that RISH harmonization effectively removes acquisition-related differences in dMRI of elderly subjects while preserving sensitivity to SVD-related effects. This study provides proof of concept for future multicentre SVD studies with pooled datasets.
KW - Cerebral small vessel disease
KW - Diffusion MRI
KW - Harmonization
KW - Multicentre
KW - White matter hyperintensities
KW - White Matter
KW - Humans
KW - Cerebral Small Vessel Diseases/diagnostic imaging
KW - Magnetic Resonance Imaging
KW - Regression Analysis
KW - Anisotropy
KW - Diffusion Magnetic Resonance Imaging
KW - Aged
UR - http://www.scopus.com/inward/record.url?scp=85119404953&partnerID=8YFLogxK
U2 - 10.1016/j.nicl.2021.102886
DO - 10.1016/j.nicl.2021.102886
M3 - Article
C2 - 34911192
AN - SCOPUS:85119404953
SN - 2213-1582
VL - 32
SP - 1
EP - 14
JO - NeuroImage: Clinical
JF - NeuroImage: Clinical
M1 - 102886
ER -