TY - JOUR
T1 - Automated identification of leukocyte subsets improves standardization of database-guided expert-supervised diagnostic orientation in acute leukemia
T2 - a EuroFlow study
AU - Lhermitte, Ludovic
AU - Barreau, Sylvain
AU - Morf, Daniela
AU - Fernandez, Paula
AU - Grigore, Georgiana
AU - Barrena, Susana
AU - de Bie, Maaike
AU - Flores-Montero, Juan
AU - Brüggemann, Monika
AU - Mejstrikova, Ester
AU - Nierkens, Stefan
AU - Burgos, Leire
AU - Caetano, Joana
AU - Gaipa, Giuseppe
AU - Buracchi, Chiara
AU - da Costa, Elaine Sobral
AU - Sedek, Lukasz
AU - Szczepański, Tomasz
AU - Aanei, Carmen-Mariana
AU - van der Sluijs-Gelling, Alita
AU - Delgado, Alejandro Hernández
AU - Fluxa, Rafael
AU - Lecrevisse, Quentin
AU - Pedreira, Carlos E
AU - van Dongen, Jacques J M
AU - Orfao, Alberto
AU - van der Velden, Vincent H J
N1 - Funding Information:
21Department of Pediatrics, Leiden University Medical Center, Leiden, The Netherlands; 22Hemato Oncology Laboratory, Instituto Portugués de Oncologia, Lisbon, Portugal; 23Department of Hematology, Cytometry Lab, Centro Hospitalar do Porto/University of Porto, Porto, Portugal; 24Abteilung für Hämatologie, Onkologie und Palliativmedizin, Medizinische Klinik III, Zentrum für Innere Medizin, Universitätsmedizin Rostock, Rostock, Germany; 25Clinical Immunology Department, University Hospital La Paz—IdiPAZ, Madrid, Spain; 26Unitat d’Hematopathologia, Hospital Clínic de Barcelona, Barcelona, Spain; 27Laboratory of Clinical Biology, University Hospital Ghent, Ghent, Belgium; 28Institute of Molecular Medicine, University of Lisbon, Lisbon, Portugal Funding The EuroFlow Consortium received support from the FP6-2004-LIFESCIHEALTH-5 program of the European Commission (grant LSHB-CT-2006-018708) as Specific Targeted Research Project (STREP). The Prague team received support from the grant number NV18-03-00343. The Salamanca team received support from the Instituto de Salud Carlos III (ISCIII) (PI16/00787-FEDER) and from Agencia Estatal de Investigación (RTC-2016-4865-1-FEDER), Min-isterio de Economía y Competitividad, Madrid, Spain. AHD is supported from the program DI-17-09591 from Agencia Estatal de Investigación, Ministerio de Ciencia, Innovación y Universidades, Madrid, Spain. SB is supported from the program PTQ16-08364 from Agencia Estatal de Investigación, Ministerio de Ciencia, Innovación y Universidades, Madrid, Spain. Medical University of Silesia in Katowice team was supported by the Strategmed III PersonALL grant [No. 304586/5/NCBR/2017] from the Polish National Center of Research and Development. The EuroFlow Consortium is part of the European Scientific Foundation for Hemato-Oncology (ESLHO), a Scientific Working Group (SWG) of the European Hematology Association (EHA).
Publisher Copyright:
© 2020, The Author(s).
PY - 2021/1
Y1 - 2021/1
N2 - Precise classification of acute leukemia (AL) is crucial for adequate treatment. EuroFlow has previously designed an AL orientation tube (ALOT) to guide toward the relevant classification panel and final diagnosis. In this study, we designed and validated an algorithm for automated (database-supported) gating and identification (AGI tool) of cell subsets within samples stained with ALOT. A reference database of normal peripheral blood (PB, n = 41) and bone marrow (BM; n = 45) samples analyzed with the ALOT was constructed, and served as a reference for the AGI tool to automatically identify normal cells. Populations not unequivocally identified as normal cells were labeled as checks and were classified by an expert. Additional normal BM (n = 25) and PB (n = 43) and leukemic samples (n = 109), analyzed in parallel by experts and the AGI tool, were used to evaluate the AGI tool. Analysis of normal PB and BM samples showed low percentages of checks (<3% in PB, <10% in BM), with variations between different laboratories. Manual analysis and AGI analysis of normal and leukemic samples showed high levels of correlation between cell numbers (r
2 > 0.95 for all cell types in PB and r
2 > 0.75 in BM) and resulted in highly concordant classification of leukemic cells by our previously published automated database-guided expert-supervised orientation tool for immunophenotypic diagnosis and classification of acute leukemia (Compass tool). Similar data were obtained using alternative, commercially available tubes, confirming the robustness of the developed tools. The AGI tool represents an innovative step in minimizing human intervention and requirements in expertise, toward a “sample-in and result-out” approach which may result in more objective and reproducible data analysis and diagnostics. The AGI tool may improve quality of immunophenotyping in individual laboratories, since high percentages of checks in normal samples are an alert on the quality of the internal procedures.
AB - Precise classification of acute leukemia (AL) is crucial for adequate treatment. EuroFlow has previously designed an AL orientation tube (ALOT) to guide toward the relevant classification panel and final diagnosis. In this study, we designed and validated an algorithm for automated (database-supported) gating and identification (AGI tool) of cell subsets within samples stained with ALOT. A reference database of normal peripheral blood (PB, n = 41) and bone marrow (BM; n = 45) samples analyzed with the ALOT was constructed, and served as a reference for the AGI tool to automatically identify normal cells. Populations not unequivocally identified as normal cells were labeled as checks and were classified by an expert. Additional normal BM (n = 25) and PB (n = 43) and leukemic samples (n = 109), analyzed in parallel by experts and the AGI tool, were used to evaluate the AGI tool. Analysis of normal PB and BM samples showed low percentages of checks (<3% in PB, <10% in BM), with variations between different laboratories. Manual analysis and AGI analysis of normal and leukemic samples showed high levels of correlation between cell numbers (r
2 > 0.95 for all cell types in PB and r
2 > 0.75 in BM) and resulted in highly concordant classification of leukemic cells by our previously published automated database-guided expert-supervised orientation tool for immunophenotypic diagnosis and classification of acute leukemia (Compass tool). Similar data were obtained using alternative, commercially available tubes, confirming the robustness of the developed tools. The AGI tool represents an innovative step in minimizing human intervention and requirements in expertise, toward a “sample-in and result-out” approach which may result in more objective and reproducible data analysis and diagnostics. The AGI tool may improve quality of immunophenotyping in individual laboratories, since high percentages of checks in normal samples are an alert on the quality of the internal procedures.
UR - http://www.scopus.com/inward/record.url?scp=85091753367&partnerID=8YFLogxK
U2 - 10.1038/s41379-020-00677-7
DO - 10.1038/s41379-020-00677-7
M3 - Article
C2 - 32999413
SN - 0893-3952
VL - 34
SP - 59
EP - 69
JO - Modern Pathology
JF - Modern Pathology
IS - 1
ER -