Abstract: the MIDOG Challenge 2021 Mitosis Domain Generalization in Histopathology Images

Marc Aubreville, Nikolas Stathonikos, Christof A. Bertram, Robert Klopfleisch, Natalie ter Hoeve, Francesco Ciompi, Frauke Wilm, Christian Marzahl, Taryn A. Donovan, Andreas Maier, Mitko Veta, Katharina Breininger

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Abstract

The density of mitotic figures (MF) within tumor tissue is known to be highly correlated with tumor malignancy and thus is an important marker in tumor grading. Recognition of MF by pathologists is subject to a strong inter-rater bias, limiting its prognostic value. State-of-the-art deep learning methods can support experts but have been observed to strongly deteriorate in a different clinical environment. The variability caused by using different whole slide scanners has been identified as one decisive component in the underlying domain shift. The goal of the MICCAI MItosis DOmain Generalization (MIDOG) 2021 challenge was the creation of scanner-agnostic MF detection algorithms. It was the first challenge to be held on the topic of histology domain generalization. The challenge used a training set of 200 cases, split across four scanning systems. The test set comprised an additional 100 cases split across four scanning systems, including two previously unseen scanners. We evaluated and compared the approaches that were submitted to the challenge and identified methodological factors contributing to better performance. The winning algorithm yielded an F1 score of 0.748 (CI95: 0.704-0.781). Additionally, we compared the performance of the algorithms to six pathologists. Irrespective of whether the original challenge ground or a newly generated object-level consensus of five experts was used as the basis for evaluation, we found that the best algorithms achieved higher performance levels than all experts. Further, the best algorithm reached the highest F1 values on either definition of the ground truth, reaching values of 0.742 and 0.748 on the five-expert consensus and the original challenge ground truth, respectively [1].

Original languageEnglish
Title of host publicationBildverarbeitung für die Medizin 2023 Proceedings, German Workshop on Medical Image Computing, Braunschweig
EditorsThomas M. Deserno, Heinz Handels, Andreas Maier, Klaus Maier-Hein, Christoph Palm, Thomas Tolxdorff
Pages115
Number of pages1
DOIs
Publication statusPublished - 2023
EventBildverarbeitung für die Medizin Workshop, BVM 2023 - Braunschweig, Germany
Duration: 2 Jul 20234 Jul 2023

Publication series

NameInformatik aktuell
ISSN (Print)1431-472X

Conference

ConferenceBildverarbeitung für die Medizin Workshop, BVM 2023
Country/TerritoryGermany
CityBraunschweig
Period2/07/234/07/23

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