TY - GEN
T1 - Abstract
T2 - Bildverarbeitung für die Medizin Workshop, BVM 2023
AU - Aubreville, Marc
AU - Stathonikos, Nikolas
AU - Bertram, Christof A.
AU - Klopfleisch, Robert
AU - ter Hoeve, Natalie
AU - Ciompi, Francesco
AU - Wilm, Frauke
AU - Marzahl, Christian
AU - Donovan, Taryn A.
AU - Maier, Andreas
AU - Veta, Mitko
AU - Breininger, Katharina
N1 - Publisher Copyright:
© 2023 Der/die Autor(en), exklusiv lizenziert an Springer Fachmedien Wiesbaden GmbH, ein Teil von Springer Nature.
PY - 2023
Y1 - 2023
N2 - The density of mitotic figures (MF) within tumor tissue is known to be highly correlated with tumor malignancy and thus is an important marker in tumor grading. Recognition of MF by pathologists is subject to a strong inter-rater bias, limiting its prognostic value. State-of-the-art deep learning methods can support experts but have been observed to strongly deteriorate in a different clinical environment. The variability caused by using different whole slide scanners has been identified as one decisive component in the underlying domain shift. The goal of the MICCAI MItosis DOmain Generalization (MIDOG) 2021 challenge was the creation of scanner-agnostic MF detection algorithms. It was the first challenge to be held on the topic of histology domain generalization. The challenge used a training set of 200 cases, split across four scanning systems. The test set comprised an additional 100 cases split across four scanning systems, including two previously unseen scanners. We evaluated and compared the approaches that were submitted to the challenge and identified methodological factors contributing to better performance. The winning algorithm yielded an F1 score of 0.748 (CI95: 0.704-0.781). Additionally, we compared the performance of the algorithms to six pathologists. Irrespective of whether the original challenge ground or a newly generated object-level consensus of five experts was used as the basis for evaluation, we found that the best algorithms achieved higher performance levels than all experts. Further, the best algorithm reached the highest F1 values on either definition of the ground truth, reaching values of 0.742 and 0.748 on the five-expert consensus and the original challenge ground truth, respectively [1].
AB - The density of mitotic figures (MF) within tumor tissue is known to be highly correlated with tumor malignancy and thus is an important marker in tumor grading. Recognition of MF by pathologists is subject to a strong inter-rater bias, limiting its prognostic value. State-of-the-art deep learning methods can support experts but have been observed to strongly deteriorate in a different clinical environment. The variability caused by using different whole slide scanners has been identified as one decisive component in the underlying domain shift. The goal of the MICCAI MItosis DOmain Generalization (MIDOG) 2021 challenge was the creation of scanner-agnostic MF detection algorithms. It was the first challenge to be held on the topic of histology domain generalization. The challenge used a training set of 200 cases, split across four scanning systems. The test set comprised an additional 100 cases split across four scanning systems, including two previously unseen scanners. We evaluated and compared the approaches that were submitted to the challenge and identified methodological factors contributing to better performance. The winning algorithm yielded an F1 score of 0.748 (CI95: 0.704-0.781). Additionally, we compared the performance of the algorithms to six pathologists. Irrespective of whether the original challenge ground or a newly generated object-level consensus of five experts was used as the basis for evaluation, we found that the best algorithms achieved higher performance levels than all experts. Further, the best algorithm reached the highest F1 values on either definition of the ground truth, reaching values of 0.742 and 0.748 on the five-expert consensus and the original challenge ground truth, respectively [1].
UR - http://www.scopus.com/inward/record.url?scp=85164944196&partnerID=8YFLogxK
U2 - 10.1007/978-3-658-41657-7_26
DO - 10.1007/978-3-658-41657-7_26
M3 - Conference contribution
AN - SCOPUS:85164944196
SN - 9783658416560
T3 - Informatik aktuell
SP - 115
BT - Bildverarbeitung für die Medizin 2023 Proceedings, German Workshop on Medical Image Computing, Braunschweig
A2 - Deserno, Thomas M.
A2 - Handels, Heinz
A2 - Maier, Andreas
A2 - Maier-Hein, Klaus
A2 - Palm, Christoph
A2 - Tolxdorff, Thomas
Y2 - 2 July 2023 through 4 July 2023
ER -