TY - JOUR
T1 - A Community Benchmark for the Automated Segmentation of Pediatric Neuroblastoma on Multi-Modal MRI
T2 - Design and Results of the SPPIN Challenge at MICCAI 2023
AU - Buser, Myrthe A.D.
AU - Simons, Dominique C.
AU - Fitski, Matthijs
AU - Wijnen, Marc H.W.A.
AU - Littooij, Annemieke S.
AU - Brugge, Annemiek H. ter
AU - Vos, Iris N.
AU - Janse, Markus H.A.
AU - de Boer, Mathijs
AU - ter Maat, Rens
AU - Sato, Junya
AU - Kido, Shoji
AU - Kondo, Satoshi
AU - Kasai, Satoshi
AU - Wodzinski, Marek
AU - Müller, Henning
AU - Ye, Jin
AU - He, Junjun
AU - Kirchhoff, Yannick
AU - Rokkus, Maximilian R.
AU - Haokai, Gao
AU - Fernández-Patón, Matías
AU - Veiga-Canuto, Diana
AU - Ellis, David G.
AU - Aizenberg, Michele
AU - van der Velden, Bas H.M.
AU - Kuijf, Hugo
AU - de Luca, Alberto
AU - van der Steeg, Alida F.W.
N1 - Publisher Copyright:
© 2025 by the authors.
PY - 2025/11
Y1 - 2025/11
N2 - Surgery plays a key role in treating neuroblastoma. To assist surgical planning, anatomical 3D models derived from the segmentation of anatomical structures on MRI scans are often used. Automation using deep learning can make segmentations less time-consuming and more reliable. We organized the Surgical Planning in PedIatric Neuroblastoma (SPPIN) challenge, to stimulate developments and benchmarking of automatic segmentation of neuroblastoma on MRI. SPPIN is the first segmentation challenge in extracranial pediatric oncology. Nine teams provided a valid submission. Evaluation was based on the Dice similarity coefficient (Dice score), the 95th percentile of the Hausdorff distance (HD95), and the volumetric similarity (VS). A combination of these scores determined the ranking of the teams. The spread in the median evaluation scores per team was large (Dice: 0.21–0.82; HD95: 63.31–7.69; VS: 0.31–0.91). The top-performing team achieved a median Dice score of 0.82 (with an HD95 of 7.69 mm and a VS of 0.91) using a large, pre-trained model. However, in the pre-operative segmentations, significantly lower evaluation scores were observed. Our results indicate that pre-training might be useful in small, pediatric datasets. Although the general results of the winning team were high, they were insufficient to use for surgical planning in small, pre-operative tumors.
AB - Surgery plays a key role in treating neuroblastoma. To assist surgical planning, anatomical 3D models derived from the segmentation of anatomical structures on MRI scans are often used. Automation using deep learning can make segmentations less time-consuming and more reliable. We organized the Surgical Planning in PedIatric Neuroblastoma (SPPIN) challenge, to stimulate developments and benchmarking of automatic segmentation of neuroblastoma on MRI. SPPIN is the first segmentation challenge in extracranial pediatric oncology. Nine teams provided a valid submission. Evaluation was based on the Dice similarity coefficient (Dice score), the 95th percentile of the Hausdorff distance (HD95), and the volumetric similarity (VS). A combination of these scores determined the ranking of the teams. The spread in the median evaluation scores per team was large (Dice: 0.21–0.82; HD95: 63.31–7.69; VS: 0.31–0.91). The top-performing team achieved a median Dice score of 0.82 (with an HD95 of 7.69 mm and a VS of 0.91) using a large, pre-trained model. However, in the pre-operative segmentations, significantly lower evaluation scores were observed. Our results indicate that pre-training might be useful in small, pediatric datasets. Although the general results of the winning team were high, they were insufficient to use for surgical planning in small, pre-operative tumors.
KW - 3D visualization
KW - challenge
KW - MRI
KW - neuroblastoma
KW - segmentation
UR - https://www.scopus.com/pages/publications/105023096117
U2 - 10.3390/bioengineering12111157
DO - 10.3390/bioengineering12111157
M3 - Article
AN - SCOPUS:105023096117
SN - 2306-5354
VL - 12
JO - Bioengineering
JF - Bioengineering
IS - 11
M1 - 1157
ER -