Adrien Melquiond

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Adrien Melquiond, PhD

 https://orcid.org/0000-0002-0167-3771
    20052024

    Research activity per year

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    • 25 Article
    • 1 Comment/Letter to the editor
    • 1 Review article

    • The HADDOCK2.4 web server for integrative modeling of biomolecular complexes

      Honorato, R. V., Trellet, M. E., Jiménez-García, B., Schaarschmidt, J. J., Giulini, M., Reys, V., Koukos, P. I., Rodrigues, J. P. G. L. M., Karaca, E., van Zundert, G. C. P., Roel-Touris, J., van Noort, C. W., Jandová, Z., Melquiond, A. S. J. & Bonvin, A. M. J. J., Nov 2024, In: Nature protocols. 19, 11, p. 3219-3241 23 p.

      Research output: Contribution to journal › Article › Academic › peer-review

      Open Access
      File

    • Robust detection of translocations in lymphoma FFPE samples using targeted locus capture-based sequencing

      Allahyar, A., Pieterse, M., Swennenhuis, J., Los-de Vries, G. T., Yilmaz, M., Leguit, R., Meijers, R. W. J., van der Geize, R., Vermaat, J., Cleven, A., van Wezel, T., Diepstra, A., van Kempen, L. C., Hijmering, N. J., Stathi, P., Sharma, M., Melquiond, A. S. J., de Vree, P. J. P., Verstegen, M. J. A. M. & Krijger, P. H. L. & 9 others, Hajo, K., Simonis, M., Rakszewska, A., van Min, M., de Jong, D., Ylstra, B., Feitsma, H., Splinter, E. & de Laat, W., 7 Jun 2021, In: Nature Communications. 12, 1, p. 1-15 3361.

      Research output: Contribution to journal › Article › Academic › peer-review

      Open Access
      File
      4 Downloads (Pure)

    • An overview of data-driven HADDOCK strategies in CAPRI rounds 38-45

      Koukos, P. I., Roel-Touris, J., Ambrosetti, F., Geng, C., Schaarschmidt, J., Trellet, M. E., Melquiond, A. S. J., Xue, L. C., Honorato, R. V., Moreira, I., Kurkcuoglu, Z., Vangone, A. & Bonvin, A. M. J. J., 1 Aug 2020, In: Proteins: Structure function and bioinformatics. 88, 8, p. 1029-1036 8 p.

      Research output: Contribution to journal › Article › Academic › peer-review

      Open Access

    • Blind prediction of homo- and hetero-protein complexes: The CASP13-CAPRI experiment

      Lensink, M. F., Brysbaert, G., Nadzirin, N., Velankar, S., Chaleil, R. A. G., Gerguri, T., Bates, P. A., Laine, E., Carbone, A., Grudinin, S., Kong, R., Liu, R.-R., Xu, X.-M., Shi, H., Chang, S., Eisenstein, M., Karczynska, A., Czaplewski, C., Lubecka, E. & Lipska, A. & 85 others, Krupa, P., Mozolewska, M., Golon, Ł., Samsonov, S., Liwo, A., Crivelli, S., Pagès, G., Karasikov, M., Kadukova, M., Yan, Y., Huang, S.-Y., Rosell, M., Rodríguez-Lumbreras, L. A., Romero-Durana, M., Díaz-Bueno, L., Fernandez-Recio, J., Christoffer, C., Terashi, G., Shin, W.-H., Aderinwale, T., Maddhuri Venkata Subraman, S. R., Kihara, D., Kozakov, D., Vajda, S., Porter, K., Padhorny, D., Desta, I., Beglov, D., Ignatov, M., Kotelnikov, S., Moal, I. H., Ritchie, D. W., Chauvot de Beauchêne, I., Maigret, B., Devignes, M.-D., Ruiz Echartea, M. E., Barradas-Bautista, D., Cao, Z., Cavallo, L., Oliva, R., Cao, Y., Shen, Y., Baek, M., Park, T., Woo, H., Seok, C., Braitbard, M., Bitton, L., Scheidman-Duhovny, D., Dapkūnas, J., Olechnovič, K., Venclovas, Č., Kundrotas, P. J., Belkin, S., Chakravarty, D., Badal, V. D., Vakser, I. A., Vreven, T., Vangaveti, S., Borrman, T., Weng, Z., Guest, J. D., Gowthaman, R., Pierce, B. G., Xu, X., Duan, R., Qiu, L., Hou, J., Ryan Merideth, B., Ma, Z., Cheng, J., Zou, X., Koukos, P. I., Roel-Touris, J., Ambrosetti, F., Geng, C., Schaarschmidt, J., Trellet, M. E., Melquiond, A. S. J., Xue, L., Jiménez-García, B., van Noort, C. W., Honorato, R. V., Bonvin, A. M. J. J. & Wodak, S. J., 1 Dec 2019, In: Proteins: Structure function and bioinformatics. 87, 12, p. 1200-1221 22 p.

      Research output: Contribution to journal › Article › Academic › peer-review

    • Performance of HADDOCK and a simple contact-based protein-ligand binding affinity predictor in the D3R Grand Challenge 2

      Kurkcuoglu, Z., Koukos, P. I., Citro, N., Trellet, M. E., Rodrigues, J. P. G. L. M., Moreira, I. S., Roel-Touris, J., Melquiond, A. S. J., Geng, C., Schaarschmidt, J., Xue, L. C., Vangone, A. & Bonvin, A. M. J. J., 1 Jan 2018, In: Journal of computer-aided molecular design. 32, 1, p. 175-185 11 p.

      Research output: Contribution to journal › Article › Academic › peer-review

    View all 27 research outputs