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  • 2024

    Effect of COVID-19 lockdown on maternity care and maternal outcome in the Netherlands: a national quasi-experimental study

    Gravesteijn, B. Y., Boderie, N. W., van den Akker, T., Bertens, L. C. M., Bloemenkamp, K., Burgos Ochoa, L., de Jonge, A., Kazemier, B. M., Klein, P. P., Kwint-Reijnders, I., Labrecque, J., Mol, B. W., Obermann, S., Peters, L., Ravelli, A. C. J., Rosman, A., Been, J., de Groot, C. J., Ambrosino, E., Auweele, K. V., & 32 othersBeen, J., Beijers, R., Bertens, L. C. M., Boderie, N., Burdorf, L., Ochoa, L. B., de Weerth, C., Franx, A., Harper, S., Klein, P. P., Kretz, D., Labrecque, J., Muris, J., Nieuwenhuijze, M., Obermann, S., Oudijk, M., Ramerman, L., Ravelli, A., Schonewille-Rosman, A., Struijs, J., Torij, H., Van Beukering, M., van den Heuvel, M., van Dillen, J., van Lenthe, F., Van Ourti, T., Verhoeff, A., Vermeulen, M., Visser, N., Willers, S., Schoenmakers, S. & Zainularab, Z., Oct 2024, In: Public Health. 235, p. 15-25 11 p.

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  • 2023

    Para-infectious brain injury in COVID-19 persists at follow-up despite attenuated cytokine and autoantibody responses

    22 Dec 2023, In: Nature Communications. 14, 1, 8487.

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  • The association of structural connectome efficiency with cognition in children with epilepsy

    Woodfield, J., Chin, R. F. M., van Schooneveld, M. M. J., van den Heuvel, M., Bastin, M. E. & Braun, K. P. J., Nov 2023, In: Epilepsy and Behavior. 148, 109462.

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  • 2022

    Reproducibility in the absence of selective reporting: An illustration from large-scale brain asymmetry research

    Jan 2022, In: Human Brain Mapping. 43, 1, p. 244-254 11 p.

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  • 2021

    Dysregulated Innate and Adaptive Immune Responses Discriminate Disease Severity in COVID-19

    Janssen, N. A. F., Grondman, I., de Nooijer, A. H., Boahen, C. K., Koeken, V. A. C. M., Matzaraki, V., Kumar, V., He, X., Kox, M., Koenen, H. J. P. M., Smeets, R. L., Joosten, I., Brüggemann, R. J. M., Kouijzer, I. J. E., van der Hoeven, H. G., Schouten, J. A., Frenzel, T., Reijers, M. H. E., Hoefsloot, W., Dofferhoff, A. S. M., & 18 othersvan Apeldoorn, M. J., Blaauw, M. J. T., Veerman, K., Maas, C., Schoneveld, A. H., Hoefer, I. E., Derde, L. P. G., van Deuren, M., van der Meer, J. W. M., van Crevel, R., Giamarellos-Bourboulis, E. J., Joosten, L. A. B., van den Heuvel, M. M., Hoogerwerf, J., de Mast, Q., Pickkers, P., Netea, M. G. & van de Veerdonk, F. L., 23 Apr 2021, In: The Journal of infectious diseases. 223, 8, p. 1322-1333 12 p.

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  • Monitoring of EGFR mutations in circulating tumor DNA of non-small cell lung cancer patients treated with EGFR inhibitors

    Verheijen, R. B., van Duijl, T. T., van den Heuvel, M. M., Vessies, D., Muller, M., Beijnen, J. H., Janssen, J. M., Schellens, J. H. M., Steeghs, N., van den Broek, D. & Huitema, A. D. R., Feb 2021, In: Cancer Chemotherapy and Pharmacology. 87, 2, p. 269-276 8 p.

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  • 2020

    Connectome-based propagation model in amyotrophic lateral sclerosis

    Meier, J. M., van der Burgh, H. K., Nitert, A. D., Bede, P., de Lange, S. C., Hardiman, O., van den Berg, L. H. & van den Heuvel, M. P., May 2020, In: Annals of Neurology. 87, 5, p. 725-738 14 p.

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  • Multimodal longitudinal study of structural brain involvement in amyotrophic lateral sclerosis

    van der Burgh, H. K., Westeneng, H-J., Walhout, R., van Veenhuijzen, K., Tan, H. H. G., Meier, J. M., Bakker, L. A., Hendrikse, J., van Es, M. A., Veldink, J. H., van den Heuvel, M. P. & van den Berg, L. H., 16 Jun 2020, In: Neurology. 94, 24, p. e2592-e2604

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  • 2019

    Connectome-Based Patterns of First-Episode Medication-Naive Patients With Schizophrenia

    Cui, L. B., Wei, Y., Xi, Y. B., Griffa, A., De Lange, S. C., Kahn, R. S., Yin, H. & Van Den Heuvel, M. P., Nov 2019, In: Schizophrenia Bulletin. 45, 6, p. 1291-1299 9 p.

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  • Cross-sectional and longitudinal assessment of the upper cervical spinal cord in motor neuron disease

    van der Burgh, H. K., Westeneng, H-J., Meier, J. M., van Es, M. A., Veldink, J. H., Hendrikse, J., van den Heuvel, M. P. & van den Berg, L. H., 2019, In: Neuroimage: Clinical [E]. 24, 101984.

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  • Functional Connectome of the Fetal Brain

    Turk, E., van den Heuvel, M. I., Benders, M. J., de Heus, R., Franx, A., Manning, J. H., Hect, J. L., Hernandez-Andrade, E., Hassan, S. S., Romero, R., Kahn, R. S., Thomason, M. E. & van den Heuvel, M. P., 4 Dec 2019, In: Journal of Neuroscience. 39, 49, p. 9716-9724 9 p.

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  • Landelijke variatie in moleculaire diagnostiek bij gemetastaseerde longkanker

    Translated title of the contribution: National variation in molecular diagnostics in metastatic lung cancerKuijpers, C. C. H. J., Van Den Heuvel, M. M., Overbeek, L. I. H., Van Slooten, H. J., Van Lindert, A. S. R., Damhuis, R. A. M. & Willems, S. M., 1 Jan 2019, In: Nederlands Tijdschrift voor Geneeskunde. 163, 1, D1607.

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  • Multiscale examination of cytoarchitectonic similarity and human brain connectivity

    Wei, Y., Scholtens, L. H., Turk, E. & van den Heuvel, M. P., 2019, In: NETWORK NEUROSCIENCE. 3, 1, p. 124-137 14 p.

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  • Notable variation of molecular testing in metastatic lung cancer in the Netherlands

    Kuijpers, C., Van den Heuvel, M., Overbeek, L., Van Lindert, A., Damhuis, R. & Willems, S., Apr 2019, In: Annals of Oncology. 30 Suppl 2, p. ii1-ii2 2 p.

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  • 2018

    A Comprehensive Pan-Cancer Molecular Study of Gynecologic and Breast Cancers

    Berger, A. C., Korkut, A., Kanchi, R. S., Hegde, A. M., Lenoir, W., Liu, W., Liu, Y., Fan, H., Shen, H., Ravikumar, V., Rao, A., Schultz, A., Li, X., Sumazin, P., Williams, C., Mestdagh, P., Gunaratne, P. H., Yau, C., Bowlby, R., Robertson, A. G., & 30 othersTiezzi, D. G., Wang, C., Cherniack, A. D., Godwin, A. K., Kuderer, N. M., Rader, J. S., Zuna, R. E., Sood, A. K., Lazar, A. J., Ojesina, A. I., Adebamowo, C., Adebamowo, S. N., Baggerly, K. A., Chen, T. W., Chiu, H. S., Lefever, S., Liu, L., MacKenzie, K., Orsulic, S., Roszik, J., Shelley, C. S., Song, Q., Vellano, C. P., Wentzensen, N., Caesar-Johnson, S. J., Demchok, J. A., Felau, I., Kasapi, M., Zhang, J. & de Krijger, R., 9 Apr 2018, In: Cancer Cell. 33, 4, p. 690-705.e9

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  • A multisample study of longitudinal changes in brain network architecture in 4-13-year-old children

    Wierenga, L. M., van den Heuvel, M. P., Oranje, B., Giedd, J. N., Durston, S., Peper, J. S., Brown, T. T. & Crone, E. A., Jan 2018, In: Human Brain Mapping. 39, 1, p. 157-170 14 p.

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  • An Integrated TCGA Pan-Cancer Clinical Data Resource to Drive High-Quality Survival Outcome Analytics

    Liu, J., Lichtenberg, T. M., Hoadley, K. A., Poisson, L. M., Lazar, A. J., Cherniack, A. D., Kovatich, A. J., Benz, C., Levine, D. A., Lee, A. V., Omberg, L., Wolf, D. M., Shriver, C. D., Thorsson, V., Caesar-Johnson, S. J., Demchok, J. A., Felau, I., Kasapi, M., Ferguson, M. L., Hutter, C. M., & 30 othersSofia, H. J., Tarnuzzer, R., Wang, Z., Yang, L., Zenklusen, J. C., Zhang, J., Chudamani, S., Liu, J., Lolla, L., Naresh, R., Pihl, T., Sun, Q., Wan, Y., Wu, Y., Cho, J., DeFreitas, T., Frazer, S., Gehlenborg, N., Getz, G., Heiman, D. I., Kim, J., Lawrence, M. S., Lin, P., Meier, S., Noble, M. S., Saksena, G., Voet, D., Zhang, H., Bernard, B. & de Krijger, R., 5 Apr 2018, In: Cell. 173, 2, p. 400-416.e11

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  • An MRI Von Economo - Koskinas atlas

    Scholtens, L. H., de Reus, M. A., de Lange, S. C., Schmidt, R. & van den Heuvel, M. P., 15 Apr 2018, In: NeuroImage. 170, p. 249-256 8 p.

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  • Association of molecular status and metastatic organs at diagnosis in patients with stage IV non-squamous non-small cell lung cancer

    Kuijpers, C. C. H. J., Hendriks, L. E. L., Derks, J. L., Dingemans, A. M. C., van Lindert, A. S. R., van den Heuvel, M. M., Damhuis, R. A. & Willems, S. M., 1 Jul 2018, In: Lung Cancer. 121, p. 76-81 6 p.

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  • Cell-of-Origin Patterns Dominate the Molecular Classification of 10,000 Tumors from 33 Types of Cancer

    Hoadley, K. A., Yau, C., Hinoue, T., Wolf, D. M., Lazar, A. J., Drill, E., Shen, R., Taylor, A. M., Cherniack, A. D., Thorsson, V., Akbani, R., Bowlby, R., Wong, C. K., Wiznerowicz, M., Sanchez-Vega, F., Robertson, A. G., Schneider, B. G., Lawrence, M. S., Noushmehr, H., Malta, T. M., & 30 othersCaesar-Johnson, S. J., Demchok, J. A., Felau, I., Kasapi, M., Ferguson, M. L., Hutter, C. M., Sofia, H. J., Tarnuzzer, R., Wang, Z., Yang, L., Zenklusen, J. C., Zhang, J., Chudamani, S., Liu, J., Lolla, L., Naresh, R., Pihl, T., Sun, Q., Wan, Y., Wu, Y., Cho, J., DeFreitas, T., Frazer, S., Gehlenborg, N., Getz, G., Heiman, D. I., Kim, J., Lawrence, M. S., Lin, P. & de Krijger, R., 5 Apr 2018, In: Cell. 173, 2, p. 291-304.e6

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  • Comprehensive Analysis of Alternative Splicing Across Tumors from 8,705 Patients

    Kahles, A., Lehmann, K. V., Toussaint, N. C., Hüser, M., Stark, S. G., Sachsenberg, T., Stegle, O., Kohlbacher, O., Sander, C., Caesar-Johnson, S. J., Demchok, J. A., Felau, I., Kasapi, M., Ferguson, M. L., Hutter, C. M., Sofia, H. J., Tarnuzzer, R., Wang, Z., Yang, L., Zenklusen, J. C., & 30 othersZhang, J., Chudamani, S., Liu, J., Lolla, L., Naresh, R., Pihl, T., Sun, Q., Wan, Y., Wu, Y., Cho, J., DeFreitas, T., Frazer, S., Gehlenborg, N., Getz, G., Heiman, D. I., Kim, J., Lawrence, M. S., Lin, P., Meier, S., Noble, M. S., Saksena, G., Voet, D., Zhang, H., Bernard, B., Chambwe, N., Dhankani, V., Knijnenburg, T., Looijenga, L., Timmers, H. & de Krijger, R., 13 Aug 2018, In: Cancer Cell. 34, 2, p. 211-224.e6

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  • Comprehensive Characterization of Cancer Driver Genes and Mutations

    Bailey, M. H., Tokheim, C., Porta-Pardo, E., Sengupta, S., Bertrand, D., Weerasinghe, A., Colaprico, A., Wendl, M. C., Kim, J., Reardon, B., Ng, P. K. S., Jeong, K. J., Cao, S., Wang, Z., Gao, J., Gao, Q., Wang, F., Liu, E. M., Mularoni, L., Rubio-Perez, C., & 30 othersNagarajan, N., Cortés-Ciriano, I., Zhou, D. C., Liang, W. W., Hess, J. M., Yellapantula, V. D., Tamborero, D., Gonzalez-Perez, A., Suphavilai, C., Ko, J. Y., Khurana, E., Park, P. J., Van Allen, E. M., Liang, H., Caesar-Johnson, S. J., Demchok, J. A., Felau, I., Kasapi, M., Ferguson, M. L., Hutter, C. M., Sofia, H. J., Tarnuzzer, R., Wang, Z., Yang, L., Zenklusen, J. C., Zhang, J., Chudamani, S., Liu, J., Lolla, L. & de Krijger, R., 5 Apr 2018, In: Cell. 173, 2, p. 371-385.e18

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  • Cortical Brain Abnormalities in 4474 Individuals With Schizophrenia and 5098 Control Subjects via the Enhancing Neuro Imaging Genetics Through Meta Analysis (ENIGMA) Consortium

    van Erp, T. G. M., Walton, E., Hibar, D. P., Schmaal, L., Jiang, W., Glahn, D. C., Pearlson, G. D., Yao, N., Fukunaga, M., Hashimoto, R., Okada, N., Yamamori, H., Bustillo, J. R., Clark, V. P., Agartz, I., Mueller, B. A., Cahn, W., de Zwarte, S. M. C., Hulshoff Pol, H. E., Kahn, R. S., & 30 othersOphoff, R. A., van Haren, N. E. M., Andreassen, O. A., Dale, A. M., Doan, N. T., Gurholt, T. P., Hartberg, C. B., Haukvik, U. K., Jørgensen, K. N., Lagerberg, T. V., Melle, I., Westlye, L. T., Gruber, O., Kraemer, B., Richter, A., Zilles, D., Calhoun, V. D., Crespo-Facorro, B., Roiz-Santiañez, R., Tordesillas-Gutiérrez, D., Loughland, C., Carr, V. J., Catts, S., Cropley, V. L., Fullerton, J. M., Green, M. J., Seal, M., Lim, K. O., Koops, S. & Sommer, I. E. C., 1 Nov 2018, In: Biological Psychiatry. 84, 9, p. 644-654 11 p.

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  • Cortical magnetization transfer abnormalities and connectome dysconnectivity in schizophrenia

    Wei, Y., Collin, G., Mandl, R. C. W., Cahn, W., Keunen, K., Schmidt, R., Kahn, R. S. & van den Heuvel, M. P., 1 Feb 2018, In: Schizophrenia Research. 192, p. 172-178 7 p.

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  • Detailed T1-Weighted Profiles from the Human Cortex Measured in Vivo at 3 Tesla MRI

    Ferguson, B., Petridou, N., Fracasso, A., van Den Heuvel, M. P., Brouwer, R. M., Hulshoff Pol, H. E., Kahn, R. S. & Mandl, R. C. W., Apr 2018, In: Neuroinformatics. 16, 2, p. 181-196 16 p.

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  • Driver Fusions and Their Implications in the Development and Treatment of Human Cancers

    Gao, Q., Liang, W. W., Foltz, S. M., Mutharasu, G., Jayasinghe, R. G., Cao, S., Liao, W. W., Reynolds, S. M., Wyczalkowski, M. A., Yao, L., Yu, L., Sun, S. Q., Caesar-Johnson, S. J., Demchok, J. A., Felau, I., Kasapi, M., Ferguson, M. L., Hutter, C. M., Sofia, H. J., Tarnuzzer, R., & 30 othersWang, Z., Yang, L., Zenklusen, J. C., Zhang, J., Chudamani, S., Liu, J., Lolla, L., Naresh, R., Pihl, T., Sun, Q., Wan, Y., Wu, Y., Cho, J., DeFreitas, T., Frazer, S., Gehlenborg, N., Getz, G., Heiman, D. I., Kim, J., Lawrence, M. S., Lin, P., Meier, S., Noble, M. S., Saksena, G., Voet, D., Zhang, H., Bernard, B., Chambwe, N., Dhankani, V. & de Krijger, R., 3 Apr 2018, In: Cell Reports. 23, 1, p. 227-238.e3

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  • Early human brain development: insights into macroscale connectome wiring

    Keunen, K., van der Burgh, H. K., de Reus, M. A., Moeskops, P., Schmidt, R., Stolwijk, L. J., de Lange, S. C., Išgum, I., de Vries, L. S., Benders, M. J. & van den Heuvel, M. P., 1 Dec 2018, In: Pediatric Research. 84, 6, p. 829-836 8 p.

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  • Fluctuations between high- and low-modularity topology in time-resolved functional connectivity

    Fukushima, M., Betzel, R. F., He, Y., de Reus, M. A., van den Heuvel, M. P., Zuo, X-N. & Sporns, O., 15 Oct 2018, In: NeuroImage. 180, Pt B, p. 406-416 11 p.

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  • Genomic, Pathway Network, and Immunologic Features Distinguishing Squamous Carcinomas

    Campbell, J. D., Yau, C., Bowlby, R., Liu, Y., Brennan, K., Fan, H., Taylor, A. M., Wang, C., Walter, V., Akbani, R., Byers, L. A., Creighton, C. J., Coarfa, C., Shih, J., Cherniack, A. D., Gevaert, O., Prunello, M., Shen, H., Anur, P., Chen, J., & 30 othersCheng, H., Hayes, D. N., Bullman, S., Pedamallu, C. S., Ojesina, A. I., Sadeghi, S., Mungall, K. L., Robertson, A. G., Benz, C., Schultz, A., Kanchi, R. S., Gay, C. M., Hegde, A. M., Diao, L., Wang, J., Ma, W., Sumazin, P., Chiu, H. S., Chen, T. W., Gunaratne, P., Donehower, L., Rader, J. S., Zuna, R., Al-Ahmadie, H., Lazar, A. J., Flores, E. R., Tsai, K. Y., Zhou, J. H., Zhang, J. & de Krijger, R., 3 Apr 2018, In: Cell Reports. 23, 1, p. 194-212.e6

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  • Genomic and Functional Approaches to Understanding Cancer Aneuploidy

    Taylor, A. M., Shih, J., Ha, G., Gao, G. F., Zhang, X., Berger, A. C., Schumacher, S. E., Wang, C., Hu, H., Liu, J., Lazar, A. J., Caesar-Johnson, S. J., Demchok, J. A., Felau, I., Kasapi, M., Ferguson, M. L., Hutter, C. M., Sofia, H. J., Tarnuzzer, R., Wang, Z., & 30 othersYang, L., Zenklusen, J. C., Zhang, J., Chudamani, S., Liu, J., Lolla, L., Naresh, R., Pihl, T., Sun, Q., Wan, Y., Wu, Y., Cho, J., DeFreitas, T., Frazer, S., Gehlenborg, N., Getz, G., Heiman, D. I., Kim, J., Lawrence, M. S., Lin, P., Meier, S., Noble, M. S., Saksena, G., Voet, D., Zhang, H., Bernard, B., Chambwe, N., Dhankani, V., Knijnenburg, T. & de Krijger, R., 9 Apr 2018, In: Cancer Cell. 33, 4, p. 676-689.e3

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  • Genomic and Molecular Landscape of DNA Damage Repair Deficiency across The Cancer Genome Atlas

    Knijnenburg, T., Wang, L., Zimmermann, M. T., Chambwe, N., Gao, G. F., Cherniack, A. D., Fan, H., Shen, H., Way, G. P., Greene, C. S., Liu, Y., Akbani, R., Feng, B., Donehower, L. A., Miller, C., Shen, Y., Karimi, M., Chen, H., Kim, P., Jia, P., & 30 othersShinbrot, E., Zhang, S., Liu, J., Hu, H., Bailey, M. H., Yau, C., Wolf, D., Zhao, Z., Weinstein, J. N., Li, L., Ding, L., Mills, G. B., Laird, P. W., Wheeler, D. A., Shmulevich, I., Caesar-Johnson, S. J., Demchok, J. A., Felau, I., Kasapi, M., Ferguson, M. L., Hutter, C. M., Sofia, H. J., Tarnuzzer, R., Wang, Z., Yang, L., Zenklusen, J. C., Zhang, J., Chudamani, S., Timmers, H. & de Krijger, R., 3 Apr 2018, In: Cell Reports. 23, 1, p. 239-254.e6

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  • Hubs in the human fetal brain network

    van den Heuvel, M. I., Turk, E., Manning, J. H., Hect, J., Hernandez-Andrade, E., Hassan, S. S., Romero, R., van den Heuvel, M. P. & Thomason, M. E., 1 Apr 2018, In: Developmental Cognitive Neuroscience. 30, p. 108-115 8 p.

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  • lncRNA Epigenetic Landscape Analysis Identifies EPIC1 as an Oncogenic lncRNA that Interacts with MYC and Promotes Cell-Cycle Progression in Cancer

    Wang, Z., Yang, B., Zhang, M., Guo, W., Wu, Z., Wang, Y., Jia, L., Li, S., Caesar-Johnson, S. J., Demchok, J. A., Felau, I., Kasapi, M., Ferguson, M. L., Hutter, C. M., Sofia, H. J., Tarnuzzer, R., Wang, Z., Yang, L., Zenklusen, J. C., Zhang, J., & 30 othersChudamani, S., Liu, J., Lolla, L., Naresh, R., Pihl, T., Sun, Q., Wan, Y., Wu, Y., Cho, J., DeFreitas, T., Frazer, S., Gehlenborg, N., Getz, G., Heiman, D. I., Kim, J., Lawrence, M. S., Lin, P., Meier, S., Noble, M. S., Saksena, G., Voet, D., Zhang, H., Bernard, B., Chambwe, N., Dhankani, V., Knijnenburg, T., Kramer, R., Leinonen, K., Liu, Y. & de Krijger, R., 9 Apr 2018, In: Cancer Cell. 33, 4, p. 706-720.e9

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  • Machine Learning Identifies Stemness Features Associated with Oncogenic Dedifferentiation

    Malta, T. M., Sokolov, A., Gentles, A. J., Burzykowski, T., Poisson, L., Weinstein, J. N., Kamińska, B., Huelsken, J., Omberg, L., Gevaert, O., Colaprico, A., Czerwińska, P., Mazurek, S., Mishra, L., Heyn, H., Krasnitz, A., Godwin, A. K., Lazar, A. J., Caesar-Johnson, S. J., Demchok, J. A., & 30 othersFelau, I., Kasapi, M., Ferguson, M. L., Hutter, C. M., Sofia, H. J., Tarnuzzer, R., Wang, Z., Yang, L., Zenklusen, J. C., Zhang, J., Chudamani, S., Liu, J., Lolla, L., Naresh, R., Pihl, T., Sun, Q., Wan, Y., Wu, Y., Cho, J., DeFreitas, T., Frazer, S., Gehlenborg, N., Getz, G., Heiman, D. I., Kim, J., Lawrence, M. S., Lin, P., Meier, S., Noble, M. S. & de Krijger, R., 5 Apr 2018, In: Cell. 173, 2, p. 338-354.e15

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    2 Citations (Scopus)

  • Mapping cortical brain asymmetry in 17,141 healthy individuals worldwide via the ENIGMA consortium

    Kong, X. Z., Mathias, S. R., Guadalupe, T., Abé, C., Agartz, I., Akudjedu, T. N., Aleman, A., Alhusaini, S., Allen, N. B., Ames, D., Andreassen, O. A., Vasquez, A. A., Armstrong, N. J., Bergo, F., Bastin, M. E., Batalla, A., Bauer, J., Baune, B. T., Baur-Streubel, R., Biederman, J., & 30 othersBlaine, S. K., Boedhoe, P., Bøen, E., Bose, A., Bralten, J., Brandeis, D., Brem, S., Brodaty, H., Yüksel, D., Brooks, S. J., Buitelaar, J., Bürger, C., Bülow, R., Calhoun, V., Calvo, A., Canales-Rodríguez, E. J., Canive, J. M., Cannon, D. M., Caparelli, E. C., Castellanos, F. X., Cavalleri, G. L., Cendes, F., Chaim-Avancini, T. M., Chantiluke, K., Chen, Q. L., Córdova-Palomera, A., Cousijn, J., De Zeeuw, P., Durston, S. & Oranje, B., 29 May 2018, In: Proceedings of the National Academy of Sciences of the United States of America. 115, 22, p. E5154-E5163

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  • Molecular Characterization and Clinical Relevance of Metabolic Expression Subtypes in Human Cancers

    Peng, X., Chen, Z., Farshidfar, F., Xu, X., Lorenzi, P. L., Wang, Y., Cheng, F., Tan, L., Mojumdar, K., Du, D., Ge, Z., Li, J., Thomas, G. V., Birsoy, K., Liu, L., Zhang, H., Zhao, Z., Marchand, C., Weinstein, J. N., Caesar-Johnson, S. J., & 30 othersDemchok, J. A., Felau, I., Kasapi, M., Ferguson, M. L., Hutter, C. M., Sofia, H. J., Tarnuzzer, R., Wang, Z., Yang, L., Zenklusen, J. C., Zhang, J., Chudamani, S., Liu, J., Lolla, L., Naresh, R., Pihl, T., Sun, Q., Wan, Y., Wu, Y., Cho, J., DeFreitas, T., Frazer, S., Gehlenborg, N., Getz, G., Heiman, D. I., Kim, J., Lawrence, M. S., Lin, P., Meier, S. & de Krijger, R., 3 Apr 2018, In: Cell Reports. 23, 1, p. 255-269.e4

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  • Network connectivity determines cortical thinning in early Parkinson's disease progression

    Yau, Y., Zeighami, Y., Baker, T. E., Larcher, K., Vainik, U., Dadar, M., Fonov, V. S., Hagmann, P., Griffa, A., Mišić, B., Collins, D. L. & Dagher, A., 1 Dec 2018, In: Nature Communications. 9, 1, 2416.

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  • No evidence for cerebellar abnormality in adults with developmental dyslexia

    van Oers, C. A. M. M., Goldberg, N., Fiorin, G., van den Heuvel, M. P., Kappelle, L. J. & Wijnen, F. N. K., 1 Nov 2018, In: Experimental Brain Research. 236, 11, p. 2991-3001 11 p.

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  • Oncogenic Signaling Pathways in The Cancer Genome Atlas

    Sanchez-Vega, F., Mina, M., Armenia, J., Chatila, W. K., Luna, A., La, K. C., Dimitriadoy, S., Liu, D. L., Kantheti, H. S., Saghafinia, S., Chakravarty, D., Daian, F., Gao, Q., Bailey, M. H., Liang, W. W., Foltz, S. M., Shmulevich, I., Ding, L., Heins, Z. J., Ochoa, A., & 30 othersGross, B. E., Gao, J., Zhang, H., Kundra, R., Kandoth, C., Bahceci, I., Dervishi, L., Dogrusoz, U., Zhou, W., Shen, H., Laird, P. W., Way, G. P., Greene, C. S., Liang, H., Xiao, Y., Wang, C., Iavarone, A., Berger, A. H., Bivona, T. G., Lazar, A. J., Hammer, G. D., Giordano, T., Kwong, L. N., McArthur, G., Huang, C., Tward, A. D., Frederick, M. J., McCormick, F., Zhang, J. & de Krijger, R., 5 Apr 2018, In: Cell. 173, 2, p. 321-337.e10

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  • Pan-cancer Alterations of the MYC Oncogene and Its Proximal Network across the Cancer Genome Atlas

    Schaub, F. X., Dhankani, V., Berger, A. C., Trivedi, M., Richardson, A. B., Shaw, R., Zhao, W., Zhang, X., Ventura, A., Liu, Y., Ayer, D. E., Hurlin, P. J., Cherniack, A. D., Eisenman, R. N., Bernard, B., Grandori, C., Caesar-Johnson, S. J., Demchok, J. A., Felau, I., Kasapi, M., & 30 othersFerguson, M. L., Hutter, C. M., Sofia, H. J., Tarnuzzer, R., Wang, Z., Yang, L., Zenklusen, J. C., Zhang, J., Chudamani, S., Liu, J., Lolla, L., Naresh, R., Pihl, T., Sun, Q., Wan, Y., Wu, Y., Cho, J., DeFreitas, T., Frazer, S., Gehlenborg, N., Getz, G., Heiman, D. I., Kim, J., Lawrence, M. S., Lin, P., Meier, S., Noble, M. S., Saksena, G., Voet, D. & de Krijger, R., 28 Mar 2018, In: Cell Systems. 6, 3, p. 282-300.e2

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  • Pan-Cancer Analysis of lncRNA Regulation Supports Their Targeting of Cancer Genes in Each Tumor Context

    Chiu, H. S., Somvanshi, S., Patel, E., Chen, T. W., Singh, V. P., Zorman, B., Patil, S. L., Pan, Y., Chatterjee, S. S., Caesar-Johnson, S. J., Demchok, J. A., Felau, I., Kasapi, M., Ferguson, M. L., Hutter, C. M., Sofia, H. J., Tarnuzzer, R., Wang, Z., Yang, L., Zenklusen, J. C., & 30 othersZhang, J., Chudamani, S., Liu, J., Lolla, L., Naresh, R., Pihl, T., Sun, Q., Wan, Y., Wu, Y., Cho, J., DeFreitas, T., Frazer, S., Gehlenborg, N., Getz, G., Heiman, D. I., Kim, J., Lawrence, M. S., Lin, P., Meier, S., Noble, M. S., Saksena, G., Voet, D., Zhang, H., Bernard, B., Chambwe, N., Dhankani, V., Knijnenburg, T., Kramer, R., Leinonen, K. & de Krijger, R., 3 Apr 2018, In: Cell Reports. 23, 1, p. 297-312.e12

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  • Pathogenic Germline Variants in 10,389 Adult Cancers

    Huang, K. L., Mashl, R. J., Wu, Y., Ritter, D. I., Wang, J., Oh, C., Paczkowska, M., Reynolds, S., Wyczalkowski, M. A., Oak, N., Scott, A. D., Krassowski, M., Cherniack, A. D., Houlahan, K. E., Jayasinghe, R., Wang, L. B., Zhou, D. C., Liu, D., Cao, S., Kim, Y. W., & 30 othersKoire, A., McMichael, J. F., Hucthagowder, V., Kim, T. B., Hahn, A., Wang, C., McLellan, M. D., Al-Mulla, F., Johnson, K. J., Caesar-Johnson, S. J., Demchok, J. A., Felau, I., Kasapi, M., Ferguson, M. L., Hutter, C. M., Sofia, H. J., Tarnuzzer, R., Wang, Z., Yang, L., Zenklusen, J. C., Zhang, J., Chudamani, S., Liu, J., Lolla, L., Naresh, R., Pihl, T., Sun, Q., Wan, Y., Wu, Y. & de Krijger, R., 5 Apr 2018, In: Cell. 173, 2, p. 355-370.e14

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  • Patterns of symptom development in patients with motor neuron disease

    Walhout, R., Verstraete, E., Van Den Heuvel, M. P., Veldink, J. H. & Van Den Berg, L. H., Feb 2018, In: Amyotrophic Lateral Sclerosis & Frontotemporal Degeneration. 19, 1-2, p. 21-28 8 p.

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  • Perspective on Oncogenic Processes at the End of the Beginning of Cancer Genomics

    Ding, L., Bailey, M. H., Porta-Pardo, E., Thorsson, V., Colaprico, A., Bertrand, D., Gibbs, D. L., Weerasinghe, A., Huang, K. L., Tokheim, C., Cortés-Ciriano, I., Jayasinghe, R., Chen, F., Yu, L., Sun, S., Olsen, C., Kim, J., Taylor, A. M., Cherniack, A. D., Akbani, R., & 30 othersSuphavilai, C., Nagarajan, N., Stuart, J. M., Mills, G. B., Wyczalkowski, M. A., Vincent, B. G., Hutter, C. M., Zenklusen, J. C., Hoadley, K. A., Wendl, M. C., Shmulevich, L., Lazar, A. J., Wheeler, D. A., Getz, G., Caesar-Johnson, S. J., Demchok, J. A., Felau, I., Kasapi, M., Ferguson, M. L., Hutter, C. M., Sofia, H. J., Tarnuzzer, R., Wang, Z., Yang, L., Zenklusen, J. C., Zhang, J., Chudamani, S., Liu, J., Lolla, L. & de Krijger, R., 5 Apr 2018, In: Cell. 173, 2, p. 305-320.e10

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  • Resilience to cognitive impairment in the oldest-old: design of the EMIF-AD 90+ study

    Legdeur, N., Badissi, M., Carter, S. F., de Crom, S., van de Kreeke, A., Vreeswijk, R., Trappenburg, M. C., Oudega, M. L., Koek, H. L., van Campen, J. P., Keijsers, C. J. P. W., Amadi, C., Hinz, R., Gordon, M. F., Novak, G., Podhorna, J., Serné, E., Verbraak, F., Yaqub, M., Hillebrand, A., & 12 othersGriffa, A., Pendleton, N., Kramer, S. E., Teunissen, C. E., Lammertsma, A., Barkhof, F., van Berckel, B. N. M., Scheltens, P., Muller, M., Maier, A. B., Herholz, K. & Visser, P. J., 26 Nov 2018, In: BMC Geriatrics [E]. 18, 1, 28.

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  • Scalable Open Science Approach for Mutation Calling of Tumor Exomes Using Multiple Genomic Pipelines

    Ellrott, K., Bailey, M. H., Saksena, G., Covington, K. R., Kandoth, C., Stewart, C., Hess, J., Ma, S., Chiotti, K. E., McLellan, M., Sofia, H. J., Hutter, C. M., Getz, G., Wheeler, D. A., Ding, L., Caesar-Johnson, S. J., Demchok, J. A., Felau, I., Kasapi, M., Ferguson, M. L., & 30 othersHutter, C. M., Sofia, H. J., Tarnuzzer, R., Wang, Z., Yang, L., Zenklusen, J. C., Zhang, J., Chudamani, S., Liu, J., Lolla, L., Naresh, R., Pihl, T., Sun, Q., Wan, Y., Wu, Y., Cho, J., DeFreitas, T., Frazer, S., Gehlenborg, N., Getz, G., Heiman, D. I., Kim, J., Lawrence, M. S., Lin, P., Meier, S., Noble, M. S., Saksena, G., Voet, D., Zhang, H. & de Krijger, R., 28 Mar 2018, In: Cell Systems. 6, 3, p. 271-281.e7

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  • Somatic Mutational Landscape of Splicing Factor Genes and Their Functional Consequences across 33 Cancer Types

    Seiler, M., Peng, S., Agrawal, A. A., Palacino, J., Teng, T., Zhu, P., Smith, P. G., Caesar-Johnson, S. J., Demchok, J. A., Felau, I., Kasapi, M., Ferguson, M. L., Hutter, C. M., Sofia, H. J., Tarnuzzer, R., Wang, Z., Yang, L., Zenklusen, J. C., Zhang, J., Chudamani, S., & 30 othersLiu, J., Lolla, L., Naresh, R., Pihl, T., Sun, Q., Wan, Y., Wu, Y., Cho, J., DeFreitas, T., Frazer, S., Gehlenborg, N., Getz, G., Heiman, D. I., Kim, J., Lawrence, M. S., Lin, P., Meier, S., Noble, M. S., Saksena, G., Voet, D., Zhang, H., Bernard, B., Chambwe, N., Dhankani, V., Knijnenburg, T., Kramer, R., Leinonen, K., Liu, Y., Timmers, H. & de Krijger, R., 3 Apr 2018, In: Cell Reports. 23, 1, p. 282-296.e4

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  • Structure-function relationships during segregated and integrated network states of human brain functional connectivity

    Fukushima, M., Betzel, R. F., He, Y., van den Heuvel, M. P., Zuo, X-N. & Sporns, O., 1 Apr 2018, In: Brain Structure and Function. 223, 3, p. 1091-1106 16 p.

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  • Systematic Analysis of Splice-Site-Creating Mutations in Cancer

    Jayasinghe, R. G., Cao, S., Gao, Q., Wendl, M. C., Vo, N. S., Reynolds, S. M., Zhao, Y., Climente-González, H., Chai, S., Wang, F., Varghese, R., Huang, M., Liang, W. W., Wyczalkowski, M. A., Sengupta, S., Li, Z., Payne, S. H., Fenyö, D., Miner, J. H., Walter, M. J., & 30 othersCaesar-Johnson, S. J., Demchok, J. A., Felau, I., Kasapi, M., Ferguson, M. L., Hutter, C. M., Sofia, H. J., Tarnuzzer, R., Wang, Z., Yang, L., Zenklusen, J. C., Zhang, J., Chudamani, S., Liu, J., Lolla, L., Naresh, R., Pihl, T., Sun, Q., Wan, Y., Wu, Y., Cho, J., DeFreitas, T., Frazer, S., Gehlenborg, N., Getz, G., Heiman, D. I., Kim, J., Lawrence, M. S., Timmers, H. & de Krijger, R., 3 Apr 2018, In: Cell Reports. 23, 1, p. 270-281.e3

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  • The Cancer Genome Atlas Comprehensive Molecular Characterization of Renal Cell Carcinoma

    Ricketts, C. J., De Cubas, A. A., Fan, H., Smith, C. C., Lang, M., Reznik, E., Bowlby, R., Gibb, E. A., Akbani, R., Beroukhim, R., Bottaro, D. P., Choueiri, T. K., Gibbs, R. A., Godwin, A. K., Haake, S., Hakimi, A. A., Henske, E. P., Hsieh, J. J., Ho, T. H., Kanchi, R. S., & 30 othersKrishnan, B., Kwaitkowski, D. J., Lui, W., Merino, M. J., Mills, G. B., Myers, J., Nickerson, M. L., Reuter, V. E., Schmidt, L. S., Shelley, C. S., Shen, H., Shuch, B., Signoretti, S., Srinivasan, R., Tamboli, P., Thomas, G., Vincent, B. G., Vocke, C. D., Wheeler, D. A., Yang, L., Kim, W. T., Robertson, A. G., Caesar-Johnson, S. J., Demchok, J. A., Felau, I., Kasapi, M., Ferguson, M. L., Hutter, C. M., Zhang, J. & de Krijger, R., 3 Apr 2018, In: Cell Reports. 23, 1, p. 313-326.e5

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