Infectious Diseases Research 1

Research output

Research output per year 1997 2015 2016 2017 2018 2019 2020 2021 2022 2024

• 96 Article
• 9 Comment/Letter to the editor
• 7 Meeting Abstract
• 6 Review article
• 13 More
  • 6 Doctoral thesis 1 (Research UU / Graduation UU)
  • 3 Letter
  • 2 Short survey
  • 1 Chapter
  • 1 Editorial

Research output per year

Research output per year

Search results

• 2024

  Host and environmental factors shape upper airway microbiota and respiratory health across the human lifespan

  Odendaal, M. L., de Steenhuijsen Piters, W. A. A., Franz, E., Chu, M. L. J. N., Groot, J. A., van Logchem, E. M., Hasrat, R., Kuiling, S., Pijnacker, R., Mariman, R., Trzciński, K., van der Klis, F. R. M., Sanders, E. A. M., Smit, L. A. M., Bogaert, D. & Bosch, T., 22 Aug 2024, In: Cell. 187, 17, p. 4571-4585.e15

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access

  File

• Impaired upper respiratory tract barrier function during postnatal development predisposes to invasive pneumococcal disease

  Lokken-Toyli, K. L., Aggarwal, S. D., Bee, G. C. W., de Steenhuijsen Piters, W. A. A., Wu, C., Chen, K. Z. M., Loomis, C., Bogaert, D. & Weiser, J. N., 8 May 2024, In: PLoS pathogens. 20, 5 , p. 1-28 28 p., e1012111.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access

  File

  • Pneumococcal Infections 100%
  • postnatal development 92%
  • respiratory system 88%
  • Respiratory System 76%
  • Streptococcus pneumoniae 67%

• Nasal cathelicidin is expressed in early life and is increased during mild, but not severe respiratory syncytial virus infection

  Sintoris, S., Binkowska, J. M., Gillan, J. L., Zuurbier, R. P., Twynam-Perkins, J., Kristensen, M., Melrose, L., Parga, P. L., Rodriguez, A. R., Chu, M. L., van Boeckel, S. R., Wildenbeest, J. G., Bowdish, D. M. E., Currie, A. J., Thwaites, R. S., Schwarze, J., van Houten, M. A., Boardman, J. P., Cunningham, S., Bogaert, D., & 1 othersDavidson, D. J., 17 Jun 2024, In: Scientific Reports. 14, 1, p. 1-18 18 p., 13928.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access

  File

  • CAP18 lipopolysaccharide-binding protein 100%
  • Respiratory Syncytial Virus Infections 90%
  • Nose 56%
  • Microbiota 19%
  • Cathelicidins 16%

• Nasopharyngeal microbiota in children is associated with severe asthma exacerbations

  van Beveren, G. J., de Steenhuijsen Piters, W. A. A., Boeschoten, S. A., Louman, S., Chu, M. L., Arp, K., Fraaij, P. L., de Hoog, M., Buysse, C., van Houten, M. A., Sanders, E. A. M., Merkus, P. J. F. M., Boehmer, A. L. & Bogaert, D., Jun 2024, In: Journal of Allergy and Clinical Immunology. 153, 6, p. 1574-1585.e14

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access

  File

  • Microbiota 100%
  • Neisseria 84%
  • Asthma 78%
  • Child 43%
  • Streptococcus 41%
• 2023

  16S rRNA-Based Microbiota Profiling Assists Conventional Culture Analysis of Airway Samples from Pediatric Cystic Fibrosis Patients

  Kristensen, M., de Koff, E. M., Chu, M. L., Groendijk, S., Tramper-Stranders, G. A., de Winter-de Groot, K. M., Janssens, H. M., Tiddens, H. A., van Westreenen, M., Sanders, E. A. M., Arets, B. H. G. M., van der Ent, C. K., Prevaes, S. M. P. J. & Bogaert, D., Jun 2023, In: Microbiology spectrum. 11, 3, p. 1-8 e0405722.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access

  File

  • cystic fibrosis 100%
  • pediatrics 92%
  • 16S Ribosomal RNA 75%
  • Microbiota 72%
  • Cystic Fibrosis 71%

• Asymptomatic Viral Presence in Early Life Precedes Recurrence of Respiratory Tract Infections

  Zuurbier, R. P., Bogaert, D., De Steenhuijsen Piters, W. A. A., Arp, K., Chu, M. L. J. N., Sanders, E. A. M. & Van Houten, M. A., 1 Jan 2023, In: Pediatric Infectious Disease Journal. 42, 1, p. 59-65 7 p.

  Research output: Contribution to journal › Article › Academic › peer-review

  • Rhinovirus 100%
  • Respiratory Tract Infections 99%
  • Recurrence 61%
  • Viruses 51%
  • Metapneumovirus 44%
  1 Citation (Scopus)

• Mother-to-infant microbiota transmission and infant microbiota development across multiple body sites

  Bogaert, D., van Beveren, G. J., de Koff, E. M., Lusarreta Parga, P., Balcazar Lopez, C. E., Koppensteiner, L., Clerc, M., Hasrat, R., Arp, K., Chu, M. L. J. N., de Groot, P. C. M., Sanders, E. A. M., van Houten, M. A. & de Steenhuijsen Piters, W. A. A., 8 Mar 2023, In: Cell Host and Microbe. 31, 3, p. 447-460.e6

  Research output: Contribution to journal › Article › Academic › peer-review

  • Child Development 100%
  • Microbiota 95%
  • microbiome 93%
  • Mothers 61%
  • sowing 45%
  7 Citations (Scopus)

• Mycoplasma pneumoniae carriage in children with recurrent respiratory tract infections is associated with a less diverse and altered microbiota

  Koenen, M. H., de Groot, R. C. A., de Steenhuijsen Piters, W. A. A., Chu, M. L. J. N., Arp, K., Hasrat, R., de Bruijn, A. C. J. M., Estevão, S. C., van der Vries, E., Langereis, J. D., Boes, M., Bogaert, D., van Rossum, A. M. C., Unger, W. W. J. & Verhagen, L. M., Dec 2023, In: EBioMedicine. 98, 14 p., 104868.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access

  File

  • Mycoplasma pneumoniae 100%
  • Microbiota 75%
  • Respiratory Tract Infections 71%
  • Pneumonia 62%
  • Antimicrobial Agent 53%
  10 Downloads (Pure)

• The early-life microbiota in relation to mucosal immune maturation and respiratory infections in children

  de Koff, E., 11 Apr 2023, Utrecht: Utrecht University. 265 p.

  Research output: Thesis › Doctoral thesis 1 (Research UU / Graduation UU)

  Open Access

  File

  • Microbiota 100%
  • Respiratory Tract Infections 93%
  • Child 43%
  • Antibody Formation 25%
  • Child Health 14%
  8 Downloads (Pure)
• 2022

  Air pollution from livestock farms and the oropharyngeal microbiome of COPD patients and controls

  van Kersen, W., Bossers, A., de Steenhuijsen Piters, W. A. A., de Rooij, M. M. T., Bonten, M., Fluit, A. C., Heederik, D., Paganelli, F. L., Rogers, M., Viveen, M., Bogaert, D., Leavis, H. L. & Smit, L. A. M., Nov 2022, In: Environment International. 169, p. 1-9 107497.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access

  File

  • chronic obstructive pulmonary disease 100%
  • livestock 65%
  • farm 58%
  • atmospheric pollution 54%
  • air pollutant 18%
  12 Downloads (Pure)

• Bacterial and fungal communities in tracheal aspirates of intubated COVID-19 patients: a pilot study

  Ruiz-Rodriguez, A., Lusarreta-Parga, P., de Steenhuijsen Piters, W. A. A., Koppensteiner, L., Balcazar-Lopez, C. E., Campbell, R., Dewar, R., McHugh, M. P., Dockrell, D., Templeton, K. E. & Bogaert, D., 14 Jun 2022, In: Scientific Reports. 12, 1, 9896.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access

  File

  • Mycobiome 100%
  • Biomass 60%
  • Coinfection 35%
  • Therapeutics 2%
  1 Citation (Scopus)

  12 Downloads (Pure)

• Early-life viral infections are associated with disadvantageous immune and microbiota profiles and recurrent respiratory infections

  de Steenhuijsen Piters, W. A. A., Watson, R. L., de Koff, E. M., Hasrat, R., Arp, K., Chu, M. L. J. N., de Groot, P. C. M., van Houten, M. A., Sanders, E. A. M. & Bogaert, D., Feb 2022, In: Nature Microbiology. 7, 2, p. 224-237 14 p.

  Research output: Contribution to journal › Article › Academic › peer-review

  • Microbiota 100%
  • Respiratory Tract Infections 93%
  • Virus Diseases 74%
  • Transcriptome 30%
  • Moraxella 26%
  11 Citations (Scopus)

• Effect of intra-partum azithromycin on the development of the infant nasopharyngeal microbiota: A post hoc analysis of a double-blind randomized trial

  Sanyang, B., de Silva, T. I., Kanteh, A., Bojang, A., Manneh, J., Piters, W. A. A. D. S., Peno, C., Bogaert, D., Sesay, A. K. & Roca, A., Sept 2022, In: EBioMedicine. 83, p. 1-14 104227.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access

  File

  • Azithromycin 100%
  • Child Development 68%
  • Microbiota 65%
  • Placebos 22%
  • Child 17%
  4 Downloads (Pure)

• Effects of early-life antibiotics on the developing infant gut microbiome and resistome: a randomized trial

  Reyman, M., van Houten, M. A., Watson, R. L., Chu, M. L. J. N., Arp, K., de Waal, W. J., Schiering, I., Plötz, F. B., Willems, R. J. L., van Schaik, W., Sanders, E. A. M. & Bogaert, D., 16 Feb 2022, In: Nature Communications. 13, 1, p. 1-12 893.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access

  File

  • antibiotics 100%
  • Gastrointestinal Microbiome 71%
  • Antimicrobial Agent 50%
  • Microbiota 47%
  • Anti-Bacterial Agents 47%
  16 Downloads (Pure)

• Higher off-target amplicon detection rate in MiSeq v3 compared to v2 reagent kits in the context of 16S-rRNA-sequencing

  Odendaal, M. L., Groot, J. A., Hasrat, R., Chu, M. L. J. N., Franz, E., Bogaert, D., Bosch, T. & de Steenhuijsen Piters, W. A. A., 1 Oct 2022, In: Scientific Reports. 12, 1, 16489.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access

  File

  • Biomass 100%
  • 16S Ribosomal RNA 84%
  • Microbiota 53%
  • Bacterial DNA 35%
  • Knowledge Bases 32%
  7 Downloads (Pure)

• High Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Household Transmission Rates Detected by Dense Saliva Sampling

  Kolodziej, L. M., van Lelyveld, S. F. L., Haverkort, M. E., Mariman, R., Sluiter-Post, J. G. C., Badoux, P., de Koff, E. M., Koole, J. C. D., Miellet, W. R., Swart, A. N., Coipan, E. C., Meijer, A., Sanders, E. A. M., Trzciński, K., Euser, S. M., Eggink, D. & van Houten, M. A., 1 Jul 2022, In: Clinical infectious diseases : an official publication of the Infectious Diseases Society of America. 75, 1, p. e10-e19

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access

  File

  • Severe Acute Respiratory Syndrome 100%
  • Coronavirus 97%
  • Saliva 75%
  • Whole Genome Sequencing 9%
  • Pandemics 8%

• Mode of delivery modulates the intestinal microbiota and impacts the response to vaccination

  de Koff, E. M., van Baarle, D., van Houten, M. A., Reyman, M., Berbers, G. A. M., van den Ham, F., Chu, M. L. J. N., Sanders, E. A. M., Bogaert, D. & Fuentes, S., 15 Nov 2022, In: Nature Communications. 13, 1, 6638.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access

  File

  • Antipneumococcal 100%
  • antibodies 64%
  • Gastrointestinal Microbiome 53%
  • delivery 51%
  • Antibody Formation 48%
  2 Citations (Scopus)

• Salivary antibody responses to ten-valent pneumococcal conjugate vaccination following two different immunization schedules in a healthy birth cohort

  de Koff, E. M., van Houten, M. A., de Heij, F., Berbers, G. A. M., Bogaert, D. & Sanders, E. A. M., 24 Jan 2022, In: Vaccine. 40, 3, p. 408-413 6 p.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access

  File

  • Immunization Schedule 100%
  • immunoglobulin G 84%
  • vaccination 79%
  • antibody formation 70%
  • immunization 70%
  17 Downloads (Pure)

• The microbiota in respiratory tract infections: from association to intervention

  Koenen, M. H., De Steenhuijsen Piters, W. A. A., Bogaert, D. & Verhagen, L. M., 1 Jun 2022, In: Current Opinion in Infectious Diseases. 35, 3, p. 215-222 8 p.

  Research output: Contribution to journal › Review article › peer-review

  • Microbiota 100%
  • Respiratory Tract Infections 93%
  • Secretory Immunoglobulin A 26%
  • Immune System 24%
  • SARS Virus 14%
  2 Citations (Scopus)
• 2021

  Benchmarking laboratory processes to characterise low-biomass respiratory microbiota

  Hasrat, R., Kool, J., de Steenhuijsen Piters, W. A. A., Chu, M. L. J. N., Kuiling, S., Groot, J. A., van Logchem, E. M., Fuentes, S., Franz, E., Bogaert, D. & Bosch, T., 25 Aug 2021, In: Scientific Reports. 11, 1, 13 p., 17148.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access

  File

  • Biomass 100%
  • Benchmarking 88%
  • Microbiota 80%
  • Polymerase Chain Reaction 30%
  • DNA 28%

• Clinical Experience With Severe Acute Respiratory Syndrome Coronavirus 2-Related Illness in Children: Hospital Experience in Cape Town, South Africa

  van der Zalm, M. M., Lishman, J., Verhagen, L. M., Redfern, A., Smit, L., Barday, M., Ruttens, D., da Costa, A., van Jaarsveld, S., Itana, J., Schrueder, N., Van Schalkwyk, M., Parker, N., Appel, I., Fourie, B., Claassen, M., Workman, J. J., Goussard, P., Van Zyl, G. & Rabie, H., 15 Jun 2021, In: Clinical infectious diseases : an official publication of the Infectious Diseases Society of America. 72, 12, p. e938-e944

  Research output: Contribution to journal › Article › Academic › peer-review

  • SARS Virus 100%
  • South Africa 71%
  • Child 29%
  • Severe Acute Respiratory Syndrome 26%
  • Coronavirus 26%

• Decreased production of epithelial-derived antimicrobial molecules at mucosal barriers during early life

  Lokken-Toyli, K. L., de Steenhuijsen Piters, W. A. A., Zangari, T., Martel, R., Kuipers, K., Shopsin, B., Loomis, C., Bogaert, D. & Weiser, J. N., Nov 2021, In: Mucosal immunology. 14, 6, p. 1358-1368 11 p.

  Research output: Contribution to journal › Article › Academic › peer-review

  • Muramidase 100%
  • Polymeric Immunoglobulin Receptors 60%
  • Respiratory System 35%
  • Infections 23%
  • Immunoglobulin A 23%
  1 Citation (Scopus)

• Development and validation of the ISARIC 4C Deterioration model for adults hospitalised with COVID-19: a prospective cohort study

  Apr 2021, In: The Lancet Respiratory Medicine. 9, 4, p. 349-359 11 p.

  Research output: Contribution to journal › Article › Academic › peer-review

  • Clinical Deterioration 100%
  • Calibration 81%
  • Cohort Studies 67%
  • Prospective Studies 63%
  • National Health Programs 62%
  77 Citations (Scopus)

• High protein prescription in methylmalonic and propionic acidemia patients and its negative association with long-term outcome

  Molema, F., Haijes, H. A., Janssen, M. C., Bosch, A. M., van Spronsen, F. J., Mulder, M. F., Verhoeven-Duif, N. M., Jans, J. J. M., van der Ploeg, A. T., Wagenmakers, M. A., Rubio-Gozalbo, M. E., Brouwers, M. C. G. J., de Vries, M. C., Fuchs, S., Langendonk, J. G., Rizopoulos, D., van Hasselt, P. M. & Williams, M., May 2021, In: Clinical Nutrition. 40, 5, p. 3622-3630 9 p.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access

  File

  • Propionic Acidemia 100%
  • Methylmalonic acidemia 95%
  • Prescriptions 52%
  • Proteins 22%
  • Recommended Dietary Allowances 22%
  13 Downloads (Pure)

• Microbial community networks across body sites are associated with susceptibility to respiratory infections in infants

  Reyman, M., Clerc, M., van Houten, M. A., Arp, K., Chu, M. L. J. N., Hasrat, R., Sanders, E. A. M. & Bogaert, D., 28 Oct 2021, In: Communications biology. 4, 1, 1233.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access

  File

  • Community Networks 100%
  • respiratory tract diseases 69%
  • Microbiota 64%
  • microbial communities 61%
  • Respiratory Tract Infections 60%
  12 Downloads (Pure)

• Nasopharyngeal microbiota profiles in rural Venezuelan children are associated with respiratory and gastrointestinal infections

  Verhagen, L. M., Rivera-Olivero, I. A., Clerc, M., Chu, M. L. J. N., van Engelsdorp Gastelaars, J., Kristensen, M. I., Berbers, G. A. M., Hermans, P. W. M., de Jonge, M. I., de Waard, J. H. & Bogaert, D., 15 Jan 2021, In: Clinical infectious diseases : an official publication of the Infectious Diseases Society of America. 72, 2, p. 212-221 10 p.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access

  File

  • Microbiota 100%
  • Respiratory Tract Infections 93%
  • Infections 48%
  • Child 43%
  • Bacteria 25%
  7 Downloads (Pure)

• PepBiotics, novel cathelicidin-inspired antimicrobials to fight pulmonary bacterial infections

  van Eijk, M., van Dijk, A., van der Ent, C. K., Arets, H. G. M., Breukink, E., van Os, N., Adrichem, R., van der Water, S., Lino Gómez, R., Kristensen, M., Hessing, M., Jekhmane, S., Weingarth, M., Veldhuizen, R. A. W., Veldhuizen, E. J. A. & Haagsman, H. P., Sept 2021, In: Biochimica et Biophysica Acta - General Subjects. 1865, 9, p. 1-11 129951.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access

  File

  • CAP18 lipopolysaccharide-binding protein 100%
  • Polypeptide Antibiotic Agent 76%
  • Cystic Fibrosis 67%
  • Bacterial Infections 64%
  • Intratracheal 56%
  5 Downloads (Pure)

• Pneumococcal colonization impairs mucosal immune responses to live attenuated influenza vaccine

  Carniel, B. F., Marcon, F., Rylance, J., German, E. L., Zaidi, S., Reiné, J., Negera, E., Nikolaou, E., Pojar, S., Solórzano, C., Collins, A. M., Connor, V., Bogaert, D., Gordon, S. B., Nakaya, H. I., Ferreira, D. M., Jochems, S. P. & Mitsi, E., 22 Feb 2021, In: JCI Insight. 6, 4, p. 1-17 e141088.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access

  File

  • Mucosal Immunity 100%
  • Attenuated Vaccines 99%
  • Influenza Vaccines 91%
  • Inactivated Vaccines 39%
  • Nose 32%
  2 Citations (Scopus)

  5 Downloads (Pure)

• Respiratory Pathogen Detection in Children: Saliva as a Diagnostic Specimen

  De Koff, E. M., Euser, S. M., Badoux, P., Sluiter-Post, J., Eggink, D., Sanders, E. A. M. & Van Houten, M. A., Sept 2021, In: Pediatric Infectious Disease Journal. 40, 9, p. E351-E353

  Research output: Contribution to journal › Article › Academic › peer-review

  • Saliva 100%
  • Confidence Intervals 61%
  • Child 44%
  • Sialorrhea 35%
  • Porifera 28%
  1 Citation (Scopus)

• Severity of Respiratory Infections With Seasonal Coronavirus Is Associated With Viral and Bacterial Coinfections

  de Koff, E. M., van Houten, M. A., Sanders, E. A. M. & Bogaert, D., Jan 2021, In: The Pediatric infectious disease journal. 40, 1, p. e36-e39 4 p.

  Research output: Contribution to journal › Article › Academic › peer-review

  • Coronavirus 100%
  • Coinfection 77%
  • Respiratory Tract Infections 73%
  • Coronavirus Infections 56%
  • Child 25%

• The effect of live attenuated influenza vaccine on pneumococcal colonisation densities among children aged 24–59 months in The Gambia: a phase 4, open label, randomised, controlled trial

  Peno, C., Armitage, E. P., Clerc, M., Balcazar Lopez, C., Jagne, Y. J., Drammeh, S., Jarju, S., Sallah, H., Senghore, E., Lindsey, B. B., Camara, J., Bah, S., Mohammed, N. I., Dockrell, D. H., Kampmann, B., Clarke, E., Bogaert, D. & de Silva, T. I., Dec 2021, In: The Lancet Microbe. 2, 12, p. e656-e665

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access

  File

  • Gambia 100%
  • Attenuated Vaccines 84%
  • Influenza Vaccines 77%
  • Randomized Controlled Trials 46%
  • Child 29%
  4 Downloads (Pure)

• The infant gut microbiome and resistome in health and disease

  Reyman, M., 1 Jul 2021, Utrecht University. 258 p.

  Research output: Thesis › Doctoral thesis 1 (Research UU / Graduation UU)

  Open Access

  File

  • antibiotic resistance genes 100%
  • microbiome 78%
  • digestive system 65%
  • respiratory tract diseases 21%
  • gentamicin 21%
  6 Downloads (Pure)

• The respiratory microbiota during and following mechanical ventilation for respiratory infections in children

  de Koff, E. M., Man, W. H., van Houten, M. A., Jansen, N. J. G., Arp, K., Hasrat, R., Sanders, E. A. M. & Bogaert, D., 1 Apr 2021, In: The European respiratory journal. 57, 4, p. 1-5 2002652.

  Research output: Contribution to journal › Comment/Letter to the editor › Academic › peer-review

  Open Access

  File
  8 Downloads (Pure)
• 2020

  100 years of influenza research seen through the lens of Covid-19

  Bogaert, D. & Dockrell, D. H., 1 Jul 2020, In: Mucosal immunology. 13, 4, p. 561-562 2 p.

  Research output: Contribution to journal › Comment/Letter to the editor › Academic › peer-review

• Bacterial DNA in Fetal Lung Samples May Be Explained by Sample Contamination

  de Steenhuijsen Piters, W. A. A. & Bogaert, D., 15 May 2020, In: American Journal of Respiratory and Critical Care Medicine. 201, 10, p. 1310-1311 2 p.

  Research output: Contribution to journal › Comment/Letter to the editor › Academic › peer-review

  Open Access

  File
  4 Downloads (Pure)

• Co-infections: potentially lethal and unexplored in COVID-19

  Cox, M. J., Loman, N., Bogaert, D. & O'Grady, J., May 2020, In: The Lancet. Microbe. 1, 1, p. e11

  Research output: Contribution to journal › Comment/Letter to the editor › Academic › peer-review

  Open Access

  File
  5 Downloads (Pure)

• COVID-19 in a child with tuberculous airway compression

  Goussard, P., Solomons, R. S., Andronikou, S., Mfingwana, L., Verhagen, L. M. & Rabie, H., 1 Sept 2020, In: Pediatric Pulmonology. 55, 9, p. 2201-2203 3 p.

  Research output: Contribution to journal › Letter › Academic › peer-review
  1 Citation (Scopus)

• COVID-19 response in low- and middle-income countries: Don't overlook the role of mobile phone communication

  Verhagen, L. M., de Groot, R., Lawrence, C. A., Taljaard, J., Cotton, M. F. & Rabie, H., Oct 2020, In: International Journal of Infectious Diseases. 99, p. 334-337 4 p.

  Research output: Contribution to journal › Short survey › peer-review

  Open Access

  File

  • Coronavirus 100%
  • Cell Phone 96%
  • Income 65%
  • Communication 59%
  • Pandemics 50%
  1 Citation (Scopus)

  6 Downloads (Pure)

• Development of the gut microbiota in early life: The impact of cystic fibrosis and antibiotic treatment

  Kristensen, M., Prevaes, S. M. P. J., Kalkman, G., Tramper-Stranders, G. A., Hasrat, R., de Winter- de Groot, K. M., Janssens, H. M., Tiddens, H. A., van Westreenen, M., Sanders, E. A. M., Arets, B., Keijser, B., van der Ent, C. K. & Bogaert, D., Jul 2020, In: Journal of Cystic Fibrosis. 19, 4, p. 553-561 9 p.

  Research output: Contribution to journal › Article › Academic › peer-review

  • Gastrointestinal Microbiome 100%
  • Cystic Fibrosis 98%
  • Anti-Bacterial Agents 66%
  • Microbiota 30%
  • Therapeutics 16%

• Early Life Microbiota and Respiratory Tract Infections

  de Steenhuijsen Piters, W. A. A., Binkowska, J. & Bogaert, D., 12 Aug 2020, In: Cell Host & Microbe. 28, 2, p. 223-232 10 p.

  Research output: Contribution to journal › Review article › peer-review

  • respiratory tract diseases 100%
  • Microbiota 91%
  • microbiome 89%
  • Respiratory Tract Infections 86%
  • pathogenesis 28%

• Early origins of lung disease: Towards an interdisciplinary approach

  Ubags, N. D. J., Alejandre Alcazar, M. A., Kallapur, S. G., Knapp, S., Lanone, S., Lloyd, C. M., Morty, R. E., Pattaroni, C., Reynaert, N. L., Rottier, R. J., Smits, H. H., de Steenhuijsen Piters, W. A. A., Strickland, D. H. & Collins, J. J. P., 30 Sept 2020, In: European Respiratory Review. 29, 157, p. 1-14 14 p., 200191.

  Research output: Contribution to journal › Review article › peer-review

  Open Access

  • Lung Diseases 100%
  • Lung 44%
  • Chronic Disease 41%
  • Portugal 34%
  • Translational Medical Research 31%
  6 Citations (Scopus)

• From doctors as patients: a manifesto for tackling persisting symptoms of covid-19

  Alwan, N. A., Attree, E., Blair, J. M., Bogaert, D., Bowen, M-A., Boyle, J., Bradman, M., Briggs, T. A., Burns, S., Campion, D., Cushing, K., Delaney, B., Dixon, C., Dolman, G. E., Dynan, C., Frayling, I. M., Freeman-Romilly, N., Hammond, I., Judge, J., Järte, L., & 19 othersLokugamage, A., MacDermott, N., MacKinnon, M., Majithia, V., Northridge, T., Powell, L., Rayner, C., Read, G., Sahu, E., Shand, C., Small, A., Strachan, C., Suett, J., Sykes, B., Taylor, S., Thomas, K., Thomson, M., Wiltshire, A. & Woods, V., 15 Sept 2020, In: BMJ (Clinical research ed.). 370, p. 1-3 m3565.

  Research output: Contribution to journal › Letter › Academic › peer-review

• Impact of preterm birth on brain development and long-term outcome: protocol for a cohort study in Scotland

  Boardman, J. P., Hall, J., Thrippleton, M. J., Reynolds, R. M., Bogaert, D., Davidson, D. J., Schwarze, J., Drake, A. J., Chandran, S., Bastin, M. E. & Fletcher-Watson, S., 4 Mar 2020, In: BMJ Open. 10, 3, p. 1-11 e035854.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access

  File

  • Scotland 100%
  • Premature Birth 91%
  • Research Ethics 61%
  • Cohort Studies 59%
  • Diffusion Magnetic Resonance Imaging 50%
  6 Downloads (Pure)

• Infant respiratory syncytial virus prophylaxis and nasopharyngeal microbiota until 6 years of life: a subanalysis of the MAKI randomised controlled trial

  Man, W. H., Scheltema, N. M., Clerc, M., van Houten, M. A., Nibbelke, E. E., Achten, N. B., Arp, K., Sanders, E. A. M., Bont, L. J. & Bogaert, D., Oct 2020, In: The Lancet Respiratory Medicine. 8, 10, p. 1022-1031 10 p.

  Research output: Contribution to journal › Article › Academic › peer-review

  • Palivizumab 100%
  • Respiratory Syncytial Viruses 75%
  • Microbiota 63%
  • Randomized Controlled Trials 43%
  • Placebos 28%

• Risk factors for atopic diseases and recurrent respiratory tract infections in children

  Kansen, H. M., Lebbink, M. A., Mul, J., van Erp, F. C., van Engelen, M., de Vries, E., Prevaes, S. M. P. J., Le, T. M., van der Ent, C. K. & Verhagen, L. M., Nov 2020, In: Pediatric Pulmonology. 55, 11, p. 3168-3179 12 p.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access

  File

  • Respiratory Tract Infections 100%
  • Odds Ratio 60%
  • Confidence Intervals 48%
  • Child 46%
  • Allergic Rhinitis 44%
  10 Downloads (Pure)

• Scientific consensus on the COVID-19 pandemic: we need to act now

  Alwan, N. A., Burgess, R. A., Ashworth, S., Beale, R., Bhadelia, N., Bogaert, D., Dowd, J., Eckerle, I., Goldman, L. R., Greenhalgh, T., Gurdasani, D., Hamdy, A., Hanage, W. P., Hodcroft, E. B., Hyde, Z., Kellam, P., Kelly-Irving, M., Krammer, F., Lipsitch, M., McNally, A., & 11 othersMcKee, M., Nouri, A., Pimenta, D., Priesemann, V., Rutter, H., Silver, J., Sridhar, D., Swanton, C., Walensky, R. P., Yamey, G. & Ziauddeen, H., 31 Oct 2020, In: The Lancet. 396, 10260, p. e71-e72

  Research output: Contribution to journal › Comment/Letter to the editor › Academic › peer-review

• The risk of tuberculosis in children after close exposure: a systematic review and individual-participant meta-analysis

  Martinez, L., Cords, O., Horsburgh, C. R. & Andrews, J. R., 21 Mar 2020, In: The Lancet. 395, 10228, p. 973-984 12 p.

  Research output: Contribution to journal › Article › Academic › peer-review

  • Tuberculosis 100%
  • Meta-Analysis 90%
  • Systematic Reviews 89%
  • Child 52%
  • Infections 8%

• The UK needs a sustainable strategy for COVID-19

  Gurdasani, D., Bear, L., Bogaert, D., Burgess, R. A., Busse, R., Cacciola, R., Charpak, Y., Colbourn, T., Drury, J., Friston, K., Gallo, V., Goldman, L. R., Greenhalgh, T., Hyde, Z., Kuppalli, K., Majumder, M. S., Martin-Moreno, J. M., McKee, M., Michie, S., Mossialos, E., & 16 othersNouri, A., Pagel, C., Pimenta, D., Popescu, S., Priesemann, V., Rasmussen, A. L., Reicher, S., Ricciardi, W., Rice, K., Silver, J., Smith, T. C., Wenham, C., West, R., Yamey, G., Yates, C. & Ziauddeen, H., 5 Dec 2020, In: The Lancet. 396, 10265, p. 1800-1801 2 p.

  Research output: Contribution to journal › Comment/Letter to the editor › Academic › peer-review
• 2019

  Author Correction: Impact of delivery mode-associated gut microbiota dynamics on health in the first year of life (Nature Communications, (2019), 10, 1, (4997), 10.1038/s41467-019-13014-7)

  Reyman, M., van Houten, M. A., van Baarle, D., Bosch, A. A. T. M., Man, W. H., Chu, M. L. J. N., Arp, K., Watson, R. L., Sanders, E. A. M., Fuentes, S. & Bogaert, D., 25 Nov 2019, In: Nature Communications. 10, 1, 5352.

  Research output: Contribution to journal › Comment/Letter to the editor › Academic › peer-review

  Open Access

  File

  • document markup languages 100%
  • sequencing 76%
  • genome 72%
  • Whole Genome Sequencing 65%
  • Firearms 63%
  1 Downloads (Pure)

• Bacterial and viral respiratory tract microbiota and host characteristics in children with lower respiratory tract infections: a matched case-control study

  Man, W. H., van Houten, M. A., Mérelle, M. E., Vlieger, A. M., Chu, M. L. J. N., Jansen, N. J. G., Sanders, E. A. M. & Bogaert, D., 1 May 2019, In: The Lancet Respiratory Medicine. 7, 5, p. 417-426 10 p.

  Research output: Contribution to journal › Article › Academic › peer-review

  • Microbiota 100%
  • Respiratory System 95%
  • Respiratory Tract Infections 93%
  • Case-Control Studies 81%
  • Child 43%
  6 Citations (Scopus)