Department of Medical Microbiology

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  • 2023

    Molecular taxonomy

    Hagen, F., Walther, G., Houbraken, J., Scott, J., Summerbell, R. & Boekhout, T., 15 Sept 2023, Diagnosis and Treatment of Fungal Infections. Hospenthal, D. R., Rinaldi, M. G. & Walsh, T. J. (eds.). 3 ed. Cham: Springer, p. 31-60 30 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

  • 2021

    Method for Depletion of IgG and IgM from Human Serum as Naive Complement Source

    Zwarthoff, S. A., Magnoni, S., Aerts, P. C., van Kessel, K. P. M. & Rooijakkers, S. H. M., 2021, The Complement System: Innovative Diagnostic and Research Protocols. Humana Press Inc., Vol. 2227. p. 21-32 12 p. (Methods in Molecular Biology; vol. 2227).

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

    2 Citations (Scopus)
  • 2019

    A flow cytometry-based approach to unravel viral interference with the MHC class I antigen processing and presentation pathway

    Praest, P., de Buhr, H. & Wiertz, E. J. H. J., 31 May 2019, Methods in Molecular Biology. van Endert, P. (ed.). 2 ed. Humana Press Inc., p. 187-198 12 p. (Methods in molecular biology (Clifton, N.J.); vol. 188).

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

  • 2017

    HIV protease inhibitor resistance

    Wensing, A. M. J., Fun, A. & Nijhuis, M., 1 Jan 2017, Handbook of Antimicrobial Resistance. Springer New York, p. 567-602 36 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

  • Identifying bacterial immune evasion proteins using phage display

    Fevre, C., Scheepmaker, L. & Haas, P. J., 1 Jan 2017, Methods in Molecular Biology. Humana Press Inc., Vol. 1535. p. 43-61 19 p. (Methods in Molecular Biology; vol. 1535).

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

    1 Citation (Scopus)
  • Staphylococcal immune evasion proteins: Structure, function, and host adaptation

    Koymans, K. J., Vrieling, M., Gorham, R. D. & van Strijp, J. A. G., 1 Jan 2017, Current Topics in Microbiology and Immunology. Springer-Verlag, Vol. 409. p. 441-489 49 p. (Current Topics in Microbiology and Immunology; vol. 409).

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

  • The role of antibiotics in prevention and management of infections after gastrointestinal surgery

    Bonten, M., Kluijtmans, J. & Mulder, T., 2017, Complications after Gastrointestinal Surgery. India: Oxford University Press, p. 76-90

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademic

  • 2015

    Immune Evasion by Epstein-Barr Virus

    Ressing, M. E., van Gent, M., Gram, A. M., Hooykaas, M. J. G., Piersma, S. J. & Wiertz, E., 2015, Epstein Barr Virus Volume. Springer, Vol. 2. p. 355-81 27 p. (Current Topics in Microbiology and Immunology ; vol. 391).

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

  • 2014

    Enterococcal Genomics

    Translated title of the contribution: Enterococcal GenomicsPalmer, K. L., van Schaik, W., Willems, R. J. L. & Gilmore, M. S., 2014, Enterococci from commensals to leading causes of drug resistant infection. Gilmore, M. S., Clewell, D. B., Ike, Y. & Shankar, N. (eds.). Boston: Internet

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

  • Enterococcus Diversity, Origins in Nature, and Gut Colonization

    lebreton, F., Willems, R. J. L. & Gilmore, M. S., 2014, Enterococci: From Commensals to Leading Causes of Drug Resistant Infection. Gilmore, M. S., Clewell, D. B., Ike, Y. & Shankar, N. (eds.). Boston: Internet

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

  • 2013

    Helicobacter pylori Infection in Iran: Epidemiology, Treatment and Diagnosis

    Talebibezminabadi, A. & Kusters, J. G., 2013, Helicobacter Pylori: A Worldwide Perspective 2013. Miklós, B. G. (ed.). Oak Park, IL USA: Bentham Science Publishers, p. 216-233 18 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

  • Main Bacteriological Features of Helicobacter Pylori

    Talebibezminabadi, A. & Kusters, J. G., 2013, Helicobacter Pylori: A Worldwide Perspective 2013. Miklós, B. G. (ed.). Oak Park: Bentham Science Publishers, p. 3-10 7 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

  • 2012

    Emergence and clonal dissemination of enterococcus faecium and enterococcus faecalis in hospitals, the community and animals

    Top, J. & Willems, R., 1 Jan 2012, Enterococcus and Safety. Semedo-Lemsaddek, T., Barreto-Crespo, M. & Tenreiro, R. (eds.). Nova Science Publishers, Inc., New York, VS, p. 127-154 28 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

  • Infectieziekten

    Translated title of the contribution: InfectieziektenHoepelman, A. I. M., Dutilh, J. C., Maarschalk - Ellerbroek, L. J., van Lelyveld, S. F. L., Troelstra, A. & Verheij, T. J. M., 2012, Diagnose en therapie 2013-2014. Houten: Bohn Stafleu van Loghum, 19 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

  • Role of Toll-Like Receptors in Asthma

    Translated title of the contribution: Role of Toll-Like Receptors in AsthmaSagar, S., Georgiou, N. A., Folkerts, G., Garssen, J. & Kraneveld, A. D., 2012, Toll-Like Receptors in Diseases of the Lung. p. 26-45 20 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

  • 2011

    Het verhaal van Pasteur. Ziekteverwerkende micro-organismen

    Translated title of the contribution: Het verhaal van Pasteur. Ziekteverwerkende micro-organismenVerhoef, J., 2011, Microcanon. Wat je beslismt moet weten over microbiologie. Smit, H., Reijnders, W., van Doorn, J., van der Oost, J. & Willemsen, P. (eds.). Diemen: Veen Magazines BV, p. 83-86 246 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterProfessional

  • Immune response in human pathology: infections caused by bacteria, viruses, fungi and parasites

    Translated title of the contribution: Immune response in human pathology: infections caused by bacteria, viruses, fungi and parasitesVerhoef, J., van Kessel, C. P. M. & Snippe, H., 2011, Principles of Immunopharmacology. Nijkamp, F. P. & Parnham, M. J. (eds.). Basel: Springer, 728 p. (3).

    Research output: Chapter in Book/Report/Conference proceedingChapterPopular

  • Infectieziekten

    Translated title of the contribution: InfectieziektenHoepelman, A. I. M., Dutilh, J. C., Maarschalk - Ellerbroek, L. J., van Lelyveld, S. F. L., Troelstra, A. & Verheij, T. J. M., 2011, Diagnose en therapie 2011. Wiersma Tj. Everdingen JJE van, G. J. (ed.). Houten: Bohn Stafleu van Loghum, p. 280-298 19 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterProfessional

  • 2010

    Infectieziekten

    Translated title of the contribution: InfectieziektenHoepelman, A. I. M., Dutilh, J. C., Maarschalk - Ellerbroek, L. J., van Lelyveld, S. F. L., Troelstra, A. & Verheij, T. J. M., 2010, Diagnose en therapie. van Everdingen, J. J. E., Glerum, J. H. & Wiersma, T. (eds.). Houten: Bohn Stafleu van Loghum, p. 280-298 993 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterProfessional

  • Mechanisms of antibacterial resistance

    Schmitz, F. J. & Fluit, A. C., 2010, Infectious Diseases. Cohen, J., Opal, S. M. & Powerdly, W. G. (eds.). Oxford: Mosby Elsevier, p. 1308-13222 11915 p. (3).

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

  • Population Genetics of Enterococcus

    Willems, R. J. L., 2010, Bacterial Population genetics in infectious disease. Robinson, D. A., Falush, D. & Feil, E. J. (eds.). New Jersey: John Wiley & Sons Inc., p. 195-216 22 p. (1; no. 1).

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

  • Streptococci, enteroocci and other catalase-negative cocci

    Mascini, E. M. & Willems, R. J. L., 2010, Infectious Diseases. Cohen, J., Powerdly, W. G. & Opal, S. M. (eds.). Oxford: Mosby Elsevier, p. 1645-1659 15 p. (3).

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademic

  • 2009

    Antiviral resistance and impact on viral replication capacity: evolution of viruses under antiviral pressure occurs in three phases

    Translated title of the contribution: Antiviral resistance and impact on viral replication capacity: evolution of viruses under antiviral pressure occurs in three phasesNijhuis, M., van Maarseveen, N. M. & Boucher, C. A. B., 2009, Antiviral Strategies. Krausslich, H.-G. & Bartenschlager, R. (eds.). Berlin Heidelberg: Springer, p. 299-320 22 p. (189).

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

  • Innate Immune Evasion by Staphylococci

    Translated title of the contribution: Innate Immune Evasion by StaphylococciVeldkamp, K. E. & van Strijp, J. A. G., 2009, Pathogen-Derived Immunomodulatory Molecules. Padraic Fallon (ed.). Trinity College Dublin: Landes Bioscience

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

  • Nosocomial Transmission: Methacillin-Resistant Staphylococcus aureaus (MRSA)

    Translated title of the contribution: Nosocomial Transmission: Methacillin-Resistant Staphylococcus aureaus (MRSA)Bonten, M. J. M. & Bootsma, M. C. J., 2009, Modern Infectious Disease Epidemiology. Dordrecht: Springer, p. 395-407 12 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterProfessional

  • 2008

    Bacterial Complement Escape

    Translated title of the contribution: Bacterial Complement EscapeJongerius, I., Ram, S. & Rooijakkers, S. H. M., 2008, Pathogen-Derived Immunomodulatory Molecules. Padraic Fallon (ed.). Trinity College Dublin: Landes Bioscience

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

  • Beyond the clinical trial: Effectiveness of antiretroviral therapy administered by General Practitioners in rural South Africa.

    Translated title of the contribution: Beyond the clinical trial: Effectiveness of antiretroviral therapy administered by General Practitioners in rural South Africa.Barth, R. E., van der Meer, J., Hoepelman, I. M., Schrooders, P., van de Vijver, D. A. M. C., Geelen, S. P. M. & Tempelman, H., 2008, Health Care in Rural South Africa.. de Die, P. (ed.). Amsterdam, the Netherlands: VU University Press, p. 263-274 12 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

  • Bloed

    Translated title of the contribution: BloedMarx, J. J. M. & Thijssen, H. H. W., 2008, Farmacologie, 4e herziene druk. Sitsen, J. M. A., Cohen, A. F., Franson, K. L., Smits, P., Struijker Boudier, H. A. J. & van Bortel, L. M. (eds.). Maarssen: Reed Business Education, p. 433-460 28 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterProfessional

  • Genetic methods for detection of bacterial resistance genes

    Translated title of the contribution: Genetic methods for detection of bacterial resistance genesFluit, A. C., 2008, Bacterial resistance to antimicrobials. Wax, R. G., Lewis, K., Salyers, A. A. & Taber, H. (eds.). Boca Raton: CRC Press, Taylor & Francis Group, p. 183-228 46 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

  • Hoofdstuk 2 Virologie

    Translated title of the contribution: Hoofdstuk 2 Virologievan 't Veen, A. & van Loon, A. M., 2008, Werkboek infectieziekten bij kinderen. Van Furth, A. M., Hartwig, N. G. & Wolfs, T. F. W. (eds.). Amsterdam: VU Uitgeverij, p. 26-44 19 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterProfessional

  • Ijzerstofwisseling en hemochromatose

    Translated title of the contribution: Ijzerstofwisseling en hemochromatoseMarx, J. J. M., 2008, Handboek Hematologie. Lowenberg, B., Ossenkoppele, G. J., de Witte, T. & Boogaarts, M. A. (eds.). Utrecht: de Tijdstroom, p. 101-116 16 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

  • Immunology of experimental synthetic carbohydrate–protein conjugate vaccines against streptococcus pneumoniae serotypes

    Translated title of the contribution: Immunology of experimental synthetic carbohydrate–protein conjugate vaccines against streptococcus pneumoniae serotypesSnippe, H., Jansen, W. T. M. & Kamerling, J. P., 2008, Carbohydrate-Based Vaccines. Roy, R. (ed.). American Chemical Society : Division of Carbohydrate Chemistry, p. 85-104 19 p. (ACS Symposium series; no. 989).

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

  • Infectieziekten (Hoofdstuk 10)

    Translated title of the contribution: Infectieziekten (Hoofdstuk 10)Verhoef, J., 2008, Farmacologie. Sitzen, J. M. A., Smits, J. F. M., Smits, P., Cohen, A. F. & Bortel, L. M. (eds.). Maarsen: Reed Business Education, (4e druk).

    Research output: Chapter in Book/Report/Conference proceedingChapterProfessional

  • 2007

    Antibioticagebruik in de kindertraumatologie

    Translated title of the contribution: Antibioticagebruik in de kindertraumatologieWolfs, T. F. W., Kimpen, J. L. L., Kramer, W. L. M. & Fleer, A., 2007, Kindertraumatologie. de Tijdstroom, p. 210-214 5 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterProfessional

  • Infectious diseases: The market of the future?

    Translated title of the contribution: Infectious diseases: The market of the future?Verhoef, J. & Fluit, A. C., 2007, Encycclopedia of Infectious Diseases. Michel Tibayrenc (ed.). Wiley & Sons Inc., p. 655-667 13 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

  • Non-respons na hepatitis-B-vaccinatie, wat nu?

    Translated title of the contribution: Non-respons na hepatitis-B-vaccinatie, wat nu?Boland, G. J., 2007, Praktische vaccinatievraagstukken. Visser, L. G. (ed.). Alphen aan den Rijn: Van Zuiden Communications, p. 83-90 7 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

  • 2006

    Antibioticagebruik in de kindertraumatologie

    Translated title of the contribution: Antibioticagebruik in de kindertraumatologieWolfs, T. F. W., Kimpen, J. L. L., Kramer, W. L. M. & Fleer, A., 2006, Handboek Kindertraumatologie. Kramer, W. L. M., ten Duis, H. J., Ekkelkamp, S., Kimpen, H. J. J., Leenen, L. P. H. & Patka, P. (eds.). Utrecht: de Tijdstroom, p. 209-214 6 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterProfessional

  • Clindamycin

    Translated title of the contribution: ClindamycinAkins, R. L., Coyle, E. A., Levison, M. E. & Verhoef, J., 2006, Antimicrobal Therapy and Vaccines, Vol II: Antimicrobial Agents. Yu, V. L., Edwards, G., McKinnon, P. S., Puloquin, C. & Morse, G. (eds.). Pittsburg PA USA: ESun Technologies LLC, p. 131-149 19 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

  • Pathogenesis of sepsis

    Translated title of the contribution: Pathogenesis of sepsisvan Leeuwen, H. J. & Verhoef, J., 2006, Infection in the cancer patients. Spence, Hay & Johnson (eds.). New York: Oxford University Press, p. 1-42 42 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

  • Sampling Micorbiota in the human gastrointestinal tract.

    Translated title of the contribution: Sampling Micorbiota in the human gastrointestinal tract.Kerckhoffs, A. P. M., Samsom, M., van Berge Henegouwen, G. P., Akkermans, L. M. A., Nieuwenhuijs, V. B. & Visser, M. R., 2006, Gastrointestinal Microbiota. Ouwehand, A. C. & Vaughan, E. E. (eds.). New York: Taylor & Francis, p. 25-50 26 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterProfessional

  • Sampling Microbiota in the Human Gastrointestinal Tract

    Translated title of the contribution: Sampling Microbiota in the Human Gastrointestinal TractKerkhoffs, A. P. M., Akkermans, L. M. A., Samson, M., van Berge Henegouwen, G. P. & Visser, M. R., 2006, Gastrointestinal Microbiology. Ouwehand, A. C. & Vaughan, E. E. (eds.). London, New York: Taylor & Francis, p. 25-50 26 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

  • 2005

    Catheter-related infections in pediatric patients

    Translated title of the contribution: Catheter-related infections in pediatric patientsFleer, A., Krediet, T. G., Gerards, L. J., Wolfs, T. F. W. & Roord, J. J., 2005, Catheter-related infections. Seifert, H., Jansen, B. & Farr, B. (eds.). New York: Marcel Dekker, p. 515-549 35 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

  • Drug Resistance and Transmission of Resistance

    Translated title of the contribution: Drug Resistance and Transmission of ResistanceBowles, E. C. & Boucher, C. A. B., 2005, Primary HIV Infection, Pathology, Diagnosis, Management. Jessen, H. & Jager, H. (eds.). Sttutgart, Germany: Thieme, p. 60-68 8 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

  • Erythrophagocytosis and decreased erythrocyte survival

    Translated title of the contribution: Erythrophagocytosis and decreased erythrocyte survivalMarx, J. J. M., 2005, Anemia of Chronic Disease. Weiss, G., Gordeuk, V. & Herchko, C. (eds.). New York, NY, USA: Marcel Dekker Inc., p. 201-227 752 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

  • Immune response in human pathology: infections caused by bacteria, viruses, fungi, and parasites

    Translated title of the contribution: Immune response in human pathology: infections caused by bacteria, viruses, fungi, and parasitesVerhoef, J. & Snippe, H., 2005, Principles of Immunopharmacology 2nd revised and extended edition. Nijkamp, F. P. & Parnham, M. J. (eds.). Basel: Birkhauser, p. 105-115 11 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

  • Improving the Therapeutic Performance of a Medical Bayesian Network using Noisy Threshold Functions.

    Translated title of the contribution: Improving the Therapeutic Performance of a Medical Bayesian Network using Noisy Threshold Functions.Visscher, S., Lucas, P. J. F., Schurink, C. A. M. & Bonten, M. J. M., 2005, Lecture Notes in Bioinformatics. Oliveira, J. L., Maojo, V., Martin-Sanchez, F. & Sousa Pereira, A. (eds.). Berlin Heidelberg, Germany: Springer-Verlag, p. 161-172 12 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

  • The blood brain barrier: monocyte and viral entry into the brain

    Translated title of the contribution: The blood brain barrier: monocyte and viral entry into the brainNottet, H. S. L. M., 2005, The Neurology of AIDS, 2nd edition. Gendelman, H. E., Grant, I., Everall, I. P., Lipton, S. A. & Swindells, S. (eds.). Oxford, England: Oxford University Press, p. 155-161 6 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

  • 2004

    Anaerobic Cocci

    Translated title of the contribution: Anaerobic CocciVerhoef, J., 2004, Principals & Practice Of Onfectious Disease. Mandell, G. L., Bennett, J. E. & Dolin, R. (eds.). Philadelphia: Churchill Livingstone, p. 2847-2849 3 p. (6th Edition (2 Volume Set ); no. CH 246).

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

  • Anaerobic Gram-Positive Nonsporulating Bacilli

    Translated title of the contribution: Anaerobic Gram-Positive Nonsporulating BacilliMascini, E. M. & Verhoef, J., 2004, Principals & Practice Of Infectious Disease. Mandell, G. L., Bennett, J. E. & Dolin, R. (eds.). Philadelphia: Churchill Livingstone, p. 2849-2852 4 p. (6th Edition (2 Volume Set); no. CH 247).

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

  • Baselineproject meet cliënten, medewerkers en zorg.

    Translated title of the contribution: Baselineproject meet cliënten, medewerkers en zorg.Havenaar, J. M., Berkhout, J., Schrijvers, A. J. P., de Weert - van Oene, G. H. & Verburg, H., 2004, Zorgprogramma's in Utrecht - vraaggericht -transparant - evidence based.. Tinnemans, W., Peters, A., Verburg, H., Havenaar, J. & Driedonks, G. (eds.). Utrecht: Uitgeverij SWP Utrecht, p. 39-54 16 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review