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  • 2025

    Current challenges and opportunities for tractography

    Rheault, F., Poulin, P., Caron, A. V., St-Onge, E., Schilling, K. G., Petit, L., Dell’Acqua, F., Leemans, A. & Descoteaux, M., 1 Jan 2025, Handbook of Diffusion MR Tractography: Imaging Methods, Biophysical Models, Algorithms and Applications. Elsevier, p. 565-580 16 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

  • Deterministic fiber tractography

    Leemans, A., Dell’Acqua, F. & Descoteaux, M., 1 Jan 2025, Handbook of Diffusion MR Tractography: Imaging Methods, Biophysical Models, Algorithms and Applications. Elsevier, p. 241-255 15 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

  • Diffusion MRI acquisition for tractography: Beyond the in vivo adult human brain

    Campbell, J. S. W., Baete, S. H., Cohen-Adad, J., Tournier, J. D., Szczepankiewicz, F., Beaulieu, C., Baron, C. A., Mani, M., Setsompop, K., Liao, C., Tardif, C. L., Vos, S. B., Yendiki, A., Leppert, I. R., Fieremans, E., De Luca, A., Leemans, A. & Pike, G. B., 1 Jan 2025, Handbook of Diffusion MR Tractography: Imaging Methods, Biophysical Models, Algorithms and Applications. Elsevier, p. 143-149 7 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

  • Diffusion MRI Data Processing and Analysis: A Practical Guide with ExploreDTI

    Connaughton, M., Leemans, A., O’Hanlon, E. & McGrath, J., 2025, Methods for Analyzing Large Neuroimaging Datasets. Whelan, R. & Lemaître, H. (eds.). Humana Press Inc., p. 197-228 32 p. (Neuromethods; vol. 218).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

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  • Diffusion MRI processing and estimation

    Tax, C. M. W., Irfanoglu, O., Andersson, J. & Leemans, A., 1 Jan 2025, Handbook of Diffusion MR Tractography: Imaging Methods, Biophysical Models, Algorithms and Applications. Elsevier, p. 151-176 26 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

  • Methods and statistics for diffusion MRI tractometry

    Chamberland, M., St-Jean, S., Jones, D. K., Descoteaux, M. & Leemans, A., 1 Jan 2025, Handbook of Diffusion MR Tractography: Imaging Methods, Biophysical Models, Algorithms and Applications. Elsevier, p. 439-450 12 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

  • Multicenter studies and harmonization: Problems, solutions, and open challenges

    Tax, C. M. W., Karayumak, S. C., Schilling, K. G., Moyer, D., Landman, B. A., Jahanshad, N. & Rathi, Y., Jan 2025, Handbook of Diffusion MR Tractography: Imaging Methods, Biophysical Models, Algorithms and Applications. Elsevier, p. 669-688 20 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

  • Multishell models

    Morez, J., De Luca, A., Pietsch, M., Christiaens, D., Baete, S. H., Reisert, M. & Jeurissen, B., 1 Jan 2025, Handbook of Diffusion MR Tractography: Imaging Methods, Biophysical Models, Algorithms and Applications. Elsevier, p. 201-220 20 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

  • Probabilistic tractography

    Girard, G., Aydogan, D. B., Dell’Acqua, F., Leemans, A., Descoteaux, M. & Sotiropoulos, S. N., 1 Jan 2025, Handbook of Diffusion MR Tractography: Imaging Methods, Biophysical Models, Algorithms and Applications. Elsevier, p. 257-274 18 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

  • Single-shell diffusion models: From DTI to HARDI

    Dell’Acqua, F., Leemans, A., Dawson, M. & Descoteaux, M., 1 Jan 2025, Handbook of Diffusion MR Tractography: Imaging Methods, Biophysical Models, Algorithms and Applications. Elsevier, p. 177-200 24 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

  • Tractography in pathological anatomy: Some general considerations

    Theaud, G., Edde, M., Leemans, A., Dell’Acqua, F., Yang, J. Y. M. & Descoteaux, M., 1 Jan 2025, Handbook of Diffusion MR Tractography: Imaging Methods, Biophysical Models, Algorithms and Applications. Elsevier, p. 363-379 17 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

  • Tractography visualization

    Chamberland, M., Poirier, C., Hendriks, T., Shastin, D., Vilanova, A. & Leemans, A., 1 Jan 2025, Handbook of Diffusion MR Tractography: Imaging Methods, Biophysical Models, Algorithms and Applications. Elsevier, p. 381-393 13 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

  • 2024

    Artificial intelligence to generate synthetic CT for adaptive particle therapy

    Thummerer, A., Zaffino, P., Spadea, M. F., Knopf, A. C. & Maspero, M., Jul 2024, Imaging in Particle Therapy: Current practice and future trends. Paganelli, C., Gianoli, C. & Knopf, A. (eds.). IOP Publishing Ltd., p. 1-16

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

  • Biophysical modeling: An approach for understanding the physiological fingerprint of the BOLD fMRI signal

    Báez-Yáñez, M. G. & Petridou, N., 2024, Computational and Network Modeling of Neuroimaging Data. Kay, K. (ed.). Elsevier, p. 119-157 39 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

  • 2023

    Machine learning-basic unsupervised methods (Cluster analysis methods, t-SNE)

    Espadoto, M., Martins, S. B., Branderhorst, W. & Telea, A., 5 Nov 2023, Clinical Applications of Artificial Intelligence in Real-World Data. Asselbergs, F. W., Denaxas, S., Oberski, D. L. & Moore, J. H. (eds.). 1 ed. Cham: Springer, p. 141-159 19 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

  • MR Angiography and Phase-Contrast MRI: Measuring Blood Flow in the Kidney

    de Boer, A., Villa, G. & Caroli, A., 18 Nov 2023, Advanced Clinical MRI of the Kidney: Methods and Protocols. Serai, S. D. & Darge, K. (eds.). 1 ed. Springer, p. 211-240 30 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

  • Neuronal Models for EEG–fMRI Integration

    Hermes, D. & Siero, J. C. W., 1 Jan 2023, EEG-fMRI: Physiological Basis, Technique, and Applications, Second Edition. Springer International Publishing, p. 625-638 14 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

  • Post-mortem Magnetic Resonance Imaging of Degenerating and Reorganizing White Matter in Post-stroke Rodent Brain

    Wielenga, V. H., Dijkhuizen, R. M. & Van der Toorn, A., 31 Jan 2023, Neural Repair: Methods and Protocols. Karamyan, V. T. & Stowe, A. M. (eds.). 1 ed. Humana New York, p. 153-168 16 p. (Methods in Molecular Biology; vol. 2616).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

  • Ultra-high Field MRI of the Kidney

    de Boer, A., Hoogduin, J. M. & Metzger, G. J., 18 Nov 2023, Advanced Clinical MRI of the Kidney: Methods and Protocols. Serai, S. D. & Darge, K. (eds.). 1 ed. Springer, p. 437-452 16 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

  • 2020

    Acquiring and Predicting Multidimensional Diffusion (MUDI) Data: An Open Challenge

    Pizzolato, M., Palombo, M., Bonet-Carne, E., Tax, C. M. W., Grussu, F., Ianus, A., Bogusz, F., Pieciak, T., Ning, L., Larochelle, H., Descoteaux, M., Chamberland, M., Blumberg, S. B., Mertzanidou, T., Alexander, D. C., Afzali, M., Aja-Fernández, S., Jones, D. K., Westin, C. F. & Rathi, Y. & 10 others, Baete, S. H., Cordero-Grande, L., Ladner, T., Slator, P. J., Hajnal, J. V., Thiran, J. P., Price, A. N., Sepehrband, F., Zhang, F. & Hutter, J., 2020, Computational Diffusion MRI: MICCAI Workshop, Shenzhen, China, October 2019. Springer Science and Business Media Deutschland GmbH, p. 195-208 14 p. (Mathematics and Visualization).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

  • High-field mri in-room guidance for radiotherapy adaptation

    Fast, M. F. & Glitzner, M., 2020, Medical Radiology. Beets-Tan, R. G. H., Oyen, W. J. G. & Valentini, V. (eds.). Springer Science and Business Media Deutschland GmbH, p. 107-128 22 p. (Medical Radiology).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

  • Real-Time Image Guidance with Magnetic Resonance

    Lagendijk, J., Raaymakers, B., Tijssen, R. & van Asselen, B., Sept 2020, The Modern Technology of Radiation Oncology. Van Dyk, J. (ed.). Medical Physics Publishing, Vol. 4. p. 95 23 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Professional

  • 2019

    Cardiovascular diseases

    Verjans, J., Veldhuis, W. B., Carneiro, G., Wolterink, J. M., Išgum, I. & Leiner, T., 29 Jan 2019, Artificial Intelligence in Medical Imaging: Opportunities, Applications and Risks. Ranschaert, E. R., Morozov, S. & Algra, P. R. (eds.). Springer International Publishing AG, p. 167-185 19 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

    1 Citation (Scopus)
  • 2017

    Magnetic Resonance Imaging of Stroke

    Bouts, M. J. R. J., Wu, O. & Dijkhuizen, R. M., 7 Mar 2017, Primer on Cerebrovascular Diseases: Second Edition. Elsevier, p. 328-332 5 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

  • 2016

    DTI analysis methods: Region of interest analysis

    Froeling, M., Pullens, P. & Leemans, A., 1 Jan 2016, Diffusion Tensor Imaging: A Practical Handbook. van Hecke, W., Emsell, L. & Sunaert, S. (eds.). Springer New York, p. 175-182 8 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

    2 Citations (Scopus)

  • Functional neuroimaging of appetite and gut-brain interactions

    Smeets, P. & Preissl, H., 2016, Neuroendocrinology of Appetite. Dickson, S. L. & Mercer, J. G. (eds.). Wiley-Blackwell, p. 174-200

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

  • Magnetic Resonance-Guided High Intensity Focused Ultrasound Ablation of Breast Cancer

    Knuttel, F. & van den Bosch, M. A. A. J., 2016, Therapeutic Ultrasound. Escoffre, J.-M. & Bouakaz, A. (eds.). Springer, Vol. I . p. 65-81 17 p. (Advances in Experimental Medicine and Biology ; vol. 880).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

  • MRI-guided HIFU methods for the ablation of liver and renal cancers

    Denis de Senneville, B., Moonen, C. & Ries, M., 2016, Advances in Experimental Medicine and Biology. Escoffre, J.-M. & Bouakaz , A. (eds.). Springer-Verlag, Vol. I. p. 43-63 21 p. (Advances in Experimental Medicine and Biology; vol. 880).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

    1 Citation (Scopus)
  • 2015

    Automatic coronary calcium scoring in cardiac CT angiography using convolutional neural networks

    Wolterink, J. M., Leiner, T., Viergever, M. A. & Isgum, I., 2015, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Springer Verlag Italia, Vol. 9349. p. 589-596 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9349).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

  • 2013

    Appetite in the brain

    Translated title of the contribution: Appetite in the brainSmeets, P. A. M., 2013, Magnetic Resonance in Food Science – Food for Thought. Belton, P. & Webb, G. (eds.). RSC Books, p. 221-230 10 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

  • Diffusion MRI and fiber tractography: The State-Of-The-Art and its Potential Impact on Patient Management

    Translated title of the contribution: Diffusion MRI and fiber tractography: The State-Of-The-Art and its Potential Impact on Patient ManagementVos, S. B., Tax, C. M. W. & Leemans, A., 2013, PET Clinics. Kwee, T. C. & Zaidi, H. (eds.). Elsevier, p. 279-293 15 p. (Evolving Medical Imaging Techniques; no. 8).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

  • Ultra-high-field MR imaging: Research tool or clinical need?

    Zwanenburg, J. J. M., van der Kolk, A. G. & Luijten, P. R., 2013, PET Clinics. p. 311-328 18 p. (8; no. 3).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

  • 2011

    Diffusion tensor imaging

    Translated title of the contribution: Diffusion tensor imagingJones, D. K. & Leemans, A., 2011, Methods in Molecular Biology, First Edition, Magnetic Resonance Neuroimaging - Methods and Protocols. Modo, M. & Bulte, J. W. M. (eds.). Humana Press, p. 127-144 18 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

  • 2010

    Diffusion tensor imaging

    Jones, D. K. & Leemans, A., 1 Dec 2010, Magnetic Resonance Neuroimaging: Methods and Protocols. Modo, M. & Bulte, J. (eds.). p. 127-144 18 p. (Methods in Molecular Biology; vol. 711).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

    138 Citations (Scopus)

  • Functional and structural MR imaging of brain reorganization after stroke

    van Meer, M. P. A. & Dijkhuizen, R. M., 2010, Brain Repair after Stroke. Cramer, S. C. & Nudo, R. J. (eds.). Cambridge: Cambridge University Press, p. 57-66 10 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Professional

  • Visualization of diffusion MR images

    Translated title of the contribution: Visualization of diffusion MR imagesLeemans, A. L. G., 2010, Diffusion MRI: Theory, Methods and Applications. Jones, D. K. (ed.). Oxford University Press, p. 354-379 26 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Professional

  • 2009

    Endoleak Imaging.

    Translated title of the contribution: Endoleak Imaging.Cornelissen, S. A. P., Verhagen, H. J. M., Prokop, W. M., Adriaensen, M. E. A. P. M., Moll, F. L. & Bartels, L. W., 2009, Vascular Aneurysms. Cao, P., Giannoukas, A. D., Moll, F. L. & Veller, M. (eds.). Volos, Greece: University of Theassaly Press, p. 207-214 8 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic

  • 2008

    Endoleak Imaging

    Translated title of the contribution: Endoleak ImagingCornelissen, S. A. P., Prokop, W. M., Verhagen, H. J. M. & Bartels, L. W., 2008, Clinical Blood Pool MR Imaging. Leiner, T., Goyen, M., Rohrer, M. & Schoenberg, S. (eds.). Springer Medizin Verlag Heidelberg, p. 139-146 8 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Professional

  • Endoleak imaging.

    Translated title of the contribution: Endoleak imaging.Cornelissen, S. A. P., Verhagen, H. J. M., Prokop, W. M., Adriaensen, M. E. A. P. M., Moll, F. L. & Bartels, L. W., 2008, Charing Cross Vascular and Endovascular Consensus Update. Greenhalgh, R. M. (ed.). London: BIBA Publishing, p. 366-372 7 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Professional

  • 2007

    Assessment of functional and neuroanatomical re-organization after experimental stroke using MRI

    Translated title of the contribution: Assessment of functional and neuroanatomical re-organization after experimental stroke using MRIvan der Zijden, J. P. & Dijkhuizen, R. M., 2007, Textbook of in vivo Imaging in Vertebrates. Ntziachristos, V., Leroy-Willig, A. & Tavitian, B. (eds.). Chicester: John Wiley & Sons Inc., p. 239-241 3 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Professional

  • 2006

    U-SPECT-I: A novel system for sub-millimeter resolution tomography of radiolabeled molecules in mice

    Translated title of the contribution: U-SPECT-I: A novel system for sub-millimeter resolution tomography of radiolabeled molecules in miceBeekman, F. J., van der Have, F., Vastenhouw, B., van der Linden, A. J. A., van Rijk, P. P., Burbach, J. P. H. & Smidt, M. P., 2006, Year Book of Nuclear Medicine. Coleman, E. R. (ed.). Mosby Inc.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

  • 2005

    Application of magnetic resonance imaging to study pathophysiology in brain disease models

    Translated title of the contribution: Application of magnetic resonance imaging to study pathophysiology in brain disease modelsDijkhuizen, R. M., 2005, MRI: Methods and Biological Applications. Prasad, P. V. (ed.). Totowa: Humana Press, p. 251-278 28 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Professional

  • A survey of three-dimensional modeling techniques for quantitative functional analysis of cardiac images

    Translated title of the contribution: A survey of three-dimensional modeling techniques for quantitative functional analysis of cardiac imagesFrangi, A. F., Niessen, W. J., Viergever, M. A. & Lelieveldt, B. P. F., 2005, Advanced Image Processing in Magnetic resonance Imaging. Landini, L. & Positano, V. (eds.). Boca Raton: Signal Processing and Communications 27, CRC Press

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Professional

  • Techniques for measuring the blood-brain barrier integrity

    Blezer, E., 1 Jan 2005, The Blood-Brain Barrier and its Microenvironment: Basic Physiology to Neurological Disease. CRC Press, p. 441-456 16 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

    3 Citations (Scopus)
  • 2003

    Color differential structure

    Translated title of the contribution: Color differential structureGeusebroek, J.-M., ter Haar Romeny, B. M., Koenderink, J. J., van den Boomgaard, R. & van Osta, P., 2003, Front-end vision and multi-scale image analysis. Ter Haar Romeny, B. M. (ed.). Kluwer Academic Publisher, p. 313-329 17 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

  • Nuclear imaging in nephrology

    Translated title of the contribution: Nuclear imaging in nephrologyde Klerk, J. M. H., Stevens, H., Koomans, H. A. & Beutler, J. J., 2003, Oxford Textbook of Clinical Nephrology. Davison et al (ed.). Oxford: Oxford University Press, p. 31-41 11 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Professional

  • Re-186-HEDP in metastatic bone pain: past, present and future

    Translated title of the contribution: Re-186-HEDP in metastatic bone pain: past, present and futurede Klerk, J. M. H., Lam, M. G. E. H., Zonnenberg, B. A. & van Rijk, P. P., 2003, Radionuclide therapy for oncology. Limouris, G. S., Biersack, H. J. & Shukla, S. K. (eds.). Athens: Mediterra-Publishers, p. 37-50 14 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Professional

  • The impact of auditive feedback on neuronavigation.

    Translated title of the contribution: The impact of auditive feedback on neuronavigation.Willems, P. W. A., Noordmans, H. J., Berkelbach van der Sprenkel, J. W., van Overbeeke, J. J., Viergever, M. A. & Tulleken, C. A. F., 2003, Computer assisted radiology and surgery (CARS). Proceedings of the 17th International Congress and Exhibition.. Lemke, H. U., Vannier, M. W., Inamura, K., Farman, A. G., Doi, K. & Reiber, J. H. C. (eds.). Amsterdam: Elsevier, p. 476-481 6 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic

  • 2002

    Non-invasive MR to 3D rotational x-ray registration of vertebral bodies

    Translated title of the contribution: Non-invasive MR to 3D rotational x-ray registration of vertebral bodiesvan de Kraats, E. B., van Walsum, T., Verlaan, J. J. & Niessen, W. J., 2002, Computer Assisted Orthopaedic Surgery. p. 98-101 4 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review

  • 2001

    F18-FDG detection of lymph node metastases in head and neck cancer with a dual-head coincidence camera: absence of benefit in a routine clinical setting

    Translated title of the contribution: F18-FDG detection of lymph node metastases in head and neck cancer with a dual-head coincidence camera: absence of benefit in a routine clinical settingvan Es, R. J., Gonesh, S. J., van Rijk, P. P. & Slootweg, P. J., 2001, Metastases in head and neck cancer. Lippert, B. M. & Werner, J. A. (eds.). Marburg: Tectum Verlag, p. 149-154 6 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review